ID A0A1A6GCY5_NEOLE Unreviewed; 170 AA.
AC A0A1A6GCY5;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 05-FEB-2025, entry version 23.
DE RecName: Full=CSD domain-containing protein {ECO:0000259|PROSITE:PS51857};
DE Flags: Fragment;
GN ORFNames=A6R68_07890 {ECO:0000313|EMBL:OBS63630.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS63630.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS63630.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS63630.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS63630.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS63630.1}.
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DR EMBL; LZPO01099511; OBS63630.1; -; Genomic_DNA.
DR STRING; 56216.A0A1A6GCY5; -.
DR OrthoDB; 422005at2759; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:TreeGrafter.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0003729; F:mRNA binding; IEA:TreeGrafter.
DR GO; GO:0031054; P:pre-miRNA processing; IEA:TreeGrafter.
DR CDD; cd04458; CSP_CDS; 1.
DR FunFam; 2.40.50.140:FF:000087; Protein lin-28 homolog B; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR051373; Lin-28_RNA-binding.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR46109; PROTEIN LIN-28; 1.
DR PANTHER; PTHR46109:SF2; PROTEIN LIN-28 HOMOLOG A; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000092124}.
FT DOMAIN 28..100
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 109..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..11
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..124
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OBS63630.1"
FT NON_TER 170
FT /evidence="ECO:0000313|EMBL:OBS63630.1"
SQ SEQUENCE 170 AA; 18678 MW; 2BBD23C2C7CF3012 CRC64;
GCTKAAEKAP EEAPADAARA ADEPQLLHGA GICKWFNVRM GFGFLSMTAR AGVALDPPVD
VFVHQSKLHM EGFRSLKEGE AVEFTFKKSA KGLESIRVTG PGGVFCIGSE RRPKGKNTQK
RRSKGDRYGP EGSXYKLLRE GSVYKLLRTV LTRCHLNQVA KEVLQDLVYN
//
