ID A0A1R3KI31_9ROSI Unreviewed; 751 AA.
AC A0A1R3KI31;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 28-JAN-2026, entry version 29.
DE SubName: Full=Zinc finger, CCCH-type {ECO:0000313|EMBL:OMP06750.1};
GN ORFNames=COLO4_07936 {ECO:0000313|EMBL:OMP06750.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMP06750.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP06750.1}.
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DR EMBL; AWUE01013504; OMP06750.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3KI31; -.
DR STRING; 93759.A0A1R3KI31; -.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 517..545
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 571..597
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 620..648
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 517..545
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 571..597
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 620..648
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 58..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 165..191
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..40
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 72..84
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 124..133
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..189
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 751 AA; 84449 MW; F1DCEF8876548A04 CRC64;
MTSSTIITKP RTWHRTNDSS TASPTPLSAN KPSFTAQTQM SRMAPSYIRK GNTLVRKPVS
VPTLSHPQAS VYRRDSRDVD ELKTKKGAGP NSKADSVDLR TGDGNAPFER PTTPPLFSFP
KVPNPTSTSN SSTLHLPVPS FSGFCETTTN HASSIEVTDV IVNSPEDGLN ASRTTDSTGA
DQNESNLAPS SAKRVMYVKP KSNQLVETSD CGRACILNAD RNQPFPVSSD GYYKKRKNQL
IRTALDSHSN EAVNISGGKR RSNKVVVKTH KPSKFSLVWT LHSARLSNND GYSLRHPKVL
PHLFPWKRMT YWRSFKLNSV SSCNSSLSTI GRKMLLLRKR NTVYTRSING FSIRKSKVLS
VGGSSLKWSK SIETLSRKAN EEATLAVAEA ERKKREWNHT ISGTGKRGYS CRKVVHGTEL
RSGERIFRIG SVRYKMDSSR RSLQRISDDE SSCSAGRLSE NNAKKSYVPR RLVIGNDEYV
RVGNGNQLVR NPKKRTRVLA SEKVRWSLHT ARLRLVKKKK YCQFFTRFGK CNKDDGKCPY
IHDPSKIAVC TKFLKGLCTN PNCKLTHKVI PDRMPDCSYY LQGLCTNENC PYRHVHVNPN
ASTCEGFLKG YCADGNECRK KHSYVCPNFE VTGSCPHGSK CKLHHPKKRS RTKKSKRSME
HKNAYGRYFG IDILEPKRVV SDTERHQALD DDDKFCDVKF SDYICLDVSD DEAGEVHRVI
NDQMAFGDND SSDLQLDDPD ELIKPIRIMN R
//
