ID A0A1R3L172_9ROSI Unreviewed; 242 AA.
AC A0A1R3L172;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 02-APR-2025, entry version 22.
DE RecName: Full=PDZ domain-containing protein {ECO:0000259|PROSITE:PS50106};
GN ORFNames=COLO4_02297 {ECO:0000313|EMBL:OMP13093.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMP13093.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP13093.1}.
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DR EMBL; AWUE01005175; OMP13093.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3L172; -.
DR STRING; 93759.A0A1R3L172; -.
DR OrthoDB; 10007415at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR Pfam; PF13650; Asp_protease_2; 1.
DR Pfam; PF17820; PDZ_6; 1.
DR SMART; SM00228; PDZ; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203}.
FT DOMAIN 138..215
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
SQ SEQUENCE 242 AA; 26980 MW; 0E2D6786A19D07FA CRC64;
MNYLIGEKIP ISIEDKKPYI NTLELVDSVT SVPIKVVLDT GAGHALSLDA SANSKIKLPN
KLINAQLGRG LSGIINGKLG RIQKLKIGKY TLQNLVASFP DSNSYKVITN TMTNPRHGNI
GCEFLRRFRV TFNYRDQYIV LKASNKNLKE PFEHNMTGME LAAKGQNYNE YLIERIEANS
PAEDAGLQEG DKLLFVNNKS SHDISISELY KLFQKGEGKP LNFVVKRGNN LIVTTLTLKR
AI
//
