ID A0A1V4JQU4_PATFA Unreviewed; 828 AA.
AC A0A1V4JQU4;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 08-OCT-2025, entry version 28.
DE SubName: Full=Collagen alpha-1(XVIII) chain {ECO:0000313|EMBL:OPJ74474.1};
GN ORFNames=AV530_001329 {ECO:0000313|EMBL:OPJ74474.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes;
OC Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ74474.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ74474.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ74474.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ74474.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ74474.1}.
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DR EMBL; LSYS01006700; OPJ74474.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4JQU4; -.
DR STRING; 372326.A0A1V4JQU4; -.
DR OrthoDB; 10060752at2759; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0005594; C:collagen type IX trimer; IEA:TreeGrafter.
DR GO; GO:0005615; C:extracellular space; IEA:TreeGrafter.
DR GO; GO:0030020; F:extracellular matrix structural constituent conferring tensile strength; IEA:TreeGrafter.
DR GO; GO:0030198; P:extracellular matrix organization; IEA:TreeGrafter.
DR Gene3D; 3.40.1620.70; -; 1.
DR Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 1.
DR Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR050149; Collagen_superfamily.
DR InterPro; IPR010515; Collagenase_NC10/endostatin.
DR InterPro; IPR016187; CTDL_fold.
DR InterPro; IPR045463; XV/XVIII_trimerization_dom.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF1114; COLLAGEN ALPHA-1(XVIII) CHAIN; 1.
DR Pfam; PF01391; Collagen; 2.
DR Pfam; PF20010; Collagen_trimer; 1.
DR Pfam; PF06482; Endostatin; 1.
DR SUPFAM; SSF56436; C-type lectin-like; 1.
PE 4: Predicted;
KW Collagen {ECO:0000256|ARBA:ARBA00023119, ECO:0000313|EMBL:OPJ74474.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..828
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5013070542"
FT DOMAIN 549..592
FT /note="Collagen type XV/XVIII trimerization"
FT /evidence="ECO:0000259|Pfam:PF20010"
FT DOMAIN 657..822
FT /note="Collagenase NC10/endostatin"
FT /evidence="ECO:0000259|Pfam:PF06482"
FT REGION 41..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 82..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..427
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 443..465
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 766..789
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 168..177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 192..203
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 204..219
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..267
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..297
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 298..312
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 313..340
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 376..385
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 387..397
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..412
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 828 AA; 84899 MW; 7FE101792DD83BB8 CRC64;
MGSGGPQRLL RALCILSVLA EHLPNATAQW FYPLGAEDTT PDPSISPAAP TGPALDVEED
AGSVEPPRKV LLSKPPLAMA PRGRQSLARG AAKAPGHALP RTRGQHRPTA APEIFEGSAE
EEEFLQIQTT AKGLPQRVLL APEMDPALQM HNRSSCVCSV RPGPPGPKGE KGDRGFPGER
GQPGFSGEKG KTGSPGQPGH QGPRGPPGPP GPPGPPGPPG TWGGRSPPMA AALPGGSENE
LGASSPAGNP GPPGPPGLPG QPGPPGYPGH EGPPGVPGRD GKPGPPGPPG PVGPPGFPGA
EGAPGSPGSA GPDGPPGAPG LPGPQGPPGV PGHEGPPGPT GPASLPGKPG LRGEPGFPGL
KGEKGEYGLP GMPGSPGRTG ETGAPGAPGP MGPPGPPGDY RCDSRHAGHR ETAGPPGPKG
EKGDPGERGC CYGEHGCKPG HLPFPGTGVQ PGSWAPISGY QTGGKEEPEI YGAIIPHGLR
GLPGNPGPPG PPGPPGAPGL LYFNRLYPSR AQQPCKQPAA TDTGWAADAD IPRTELPDSR
ADLQRQTWVF RSKELMLKSG SAVPEGSLVY VREGSSAFLR TPTGWSRLLL EDSESLFAGD
DPSASTPQYQ AAKRAQMKGD NTGTPVLAQT HSLVQKQEGQ GLPQIPPTTI APRIPSLRLA
ALNVPLAGDM SGVRGADLQC YRQSQEAQLY GTFRAFLSAP TQDLVSIVKR TDRTLPVVNL
KGQLLAKSWS SLFNGQAGAV PRGPIYSFNG RNVLTDPLWP QRLAWHGSTP RGGHARRRDC
QGWRSSGPGE GLAAPLGEGR LLAGQRHNCS QALAVLCVEV AFPYRHMW
//
