ID A0A1W0VTY8_SORBI Unreviewed; 1787 AA.
AC A0A1W0VTY8;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 08-OCT-2025, entry version 23.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=SORBI_3010G201500 {ECO:0000313|EMBL:OQU76753.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU76753.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU76753.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000769; OQU76753.1; -; Genomic_DNA.
DR Gramene; OQU76753; OQU76753; SORBI_3010G201500.
DR Proteomes; UP000000768; Chromosome 10.
DR ExpressionAtlas; A0A1W0VTY8; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-ARBA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1549..1578
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1604..1630
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1631..1658
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1549..1578
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1604..1630
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1631..1658
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 144..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 169..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..279
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 325..345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 481..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 734..772
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 961..996
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1017..1045
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1060..1126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1138..1158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1301..1322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1460..1496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..129
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 144..153
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..193
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 325..334
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 485..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 754..767
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 976..985
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1031..1041
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1097..1111
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1140..1155
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1302..1318
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1475..1487
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1787 AA; 194572 MW; 01CF1626E01FD1B0 CRC64;
MHDSGDREST SSSGPPPRRQ RQQLHPSYSP PPDDSFVDRA TSYSCYGSHE GFVAHGDSNG
NRKMPMSMST MLPGSPRRAP QKMAPTRLSV WHRIEENPSL YTPPSPRKVP KEVHISPSKT
KNSGSASKEL SSVISLDCKA KSSDCKGSDD SAGMKKNVAK KTEKVLSSVI VKPSPEDKEK
ERAVNKVTKK PDKVGNSIPG FTSAGVRSAA FPGSGVKKVK KIVIKKIVRK IGAKDKQTSS
SIVSEKDSID ANVNASEKEE ADANASEKEE GEITTSSLEK DAISAHNLVS TSDTAGVANS
LEVQKEQDSD LVNLKKNNAA STIASTDTVD TANASRRKHP EKEDYKSFVK SIDGNASPAI
ESIKTFNASG VEHPGKEDDG CFTNSSVKNG TLNCENNNSQ QEEEGEILAV SGPVNVANNC
PRILDAVEPH DCEVENMEDN KVPEVLSGNS AVYVNGAKDC TTEVSGSEND RREEGLFLLN
DPIRSPSTDE VSMTPSKDNH EKEGMNLIGA SEVCAASVGQ PEGNPKIAEA TVAHGAHKEE
GNLLNSPREK DAASFGSWGT LDTTEVSANE ITQEKEWRTP IEPNEATTSA HHVKALSTLE
INVSENIQKE SQMPMDSSAF QTVECAEAPN IVEVVSSKFA QNVACKSPMA LNGTNVGTSD
NSLYTEDSNM QVDFHDVKAA LSKSDLPLDV VDTDTYALQS SRNTESIIMP SLDDDPMKIS
SGAVILNNGV GKSTSSQVAG LTHLHRPHPP PDNNPSSLHS HDSPSVSGNS EHSVRTALTL
GNNMYFSSAE SEGQLGEKHN LVDVNQGFDV TMTEFGNVSK RKSESGNGFM NAGSQNWLTL
PLTVSCLDND AAGSNERLGL EQIVDEGASV CQDHDSMPDI DQRGSIDIFS CQDHSLKLCD
ISMPQADLLA TEEGNKDVED EIVLPGSSVN SVNVLDPYSF RTVDKPIDNL NKRILLSSQS
ADAPGRELAS SQVSVDSDHT YHGSSEDPVG VSSTTPDSIS SWIEAIVSEA KKEHQSCKSS
LLPISSPDKV SAPKEDSKKA LSDSVVNSVV KSPPRVNIAS STVSKVPTKQ VALPGSLRAP
PRLNQNARNR TWRRDNASSS NSLLHVSQTS GLPPKLPVKK NSKSQNSYIR KGNALIRNPA
TGNLHSSSLD SQNKSKPVMR RSMNFVRKVD SKDVGHSHIS VERPKTPPLP LHTKSISCDV
NILEPLSQNL QQQVIETEKE DSSGQVNSGA DIPSIISSHK SEALDAGKAI YVRPKLNQVV
VAQGQHLCES SNLPLDKVTL LQPSTTSDLY FKKRKNQIIL GPSTSDAPSS KDTSQAENIK
SGESKVLMSA SSNNNITVAK DRPHKALQTT NTVRSSSHVW TLSGQNPRKK SFVGAIHMKV
FPRILPWKRK IFCQNFRGSY SSLLNTSSIG IMRKLLQTRK RSTIYTVSTD GFSLRKSGVL
SIGGSSLKWS RSLEKHSQKV NEEATQAVAE VERKKREKRK RQSLRNKGRN DRYSASVAAN
QLTNSSRASS EYVRVNKGNQ LVRNPKKVIR MLASEKVRWS LHTVRRRLAK KQQYCQFFTR
FGECKKSGGK CPYIHDRAKV AICTKFLNGL CSSTSCKLTH KVLPERMPDC SYFLQGLCTN
TACPYRHVKV NSNAPVCEDF LKGYCADGDE CRKKHSYVCP VFEATGECPQ ESRCKLHHPK
KKNKSKRSKV DTVQNNSWGR YFETSIGHGS GARIVSLEEE ERQKPEQVSG EDFADFIELG
SDIEVPEDAD ASDDIQPMEL DSGNLDMQAD NLEAIIKPLR IMRTARV
//
