ID A0A2I0MXH4_COLLI Unreviewed; 1291 AA.
AC A0A2I0MXH4;
DT 28-FEB-2018, integrated into UniProtKB/TrEMBL.
DT 28-FEB-2018, sequence version 1.
DT 10-JUN-2026, entry version 35.
DE RecName: Full=Zinc finger transcription factor Trps1 {ECO:0000256|ARBA:ARBA00073694};
GN Name=TRPS1 {ECO:0000313|EMBL:PKK34370.1};
GN ORFNames=A306_00001255 {ECO:0000313|EMBL:PKK34370.1};
OS Columba livia (Rock dove).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes;
OC Columbidae; Columba.
OX NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK34370.1, ECO:0000313|Proteomes:UP000053872};
RN [1] {ECO:0000313|EMBL:PKK34370.1, ECO:0000313|Proteomes:UP000053872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Blood {ECO:0000313|EMBL:PKK34370.1};
RX PubMed=23371554; DOI=10.1126/science.1230422;
RA Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL Science 339:1063-1067(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKK34370.1}.
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DR EMBL; AKCR02000001; PKK34370.1; -; Genomic_DNA.
DR STRING; 8932.A0A2I0MXH4; -.
DR GeneID; 102085042; -.
DR KEGG; clv:102085042; -.
DR CTD; 7227; -.
DR InParanoid; A0A2I0MXH4; -.
DR OrthoDB; 230880at8782; -.
DR Proteomes; UP000053872; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:TreeGrafter.
DR CDD; cd00202; ZnF_GATA; 1.
DR FunFam; 3.30.160.60:FF:001213; Transcriptional repressor GATA binding 1; 1.
DR FunFam; 3.30.50.10:FF:000020; Zinc finger transcription factor Trps1; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR028440; TRPS1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR47034; ZINC FINGER TRANSCRIPTION FACTOR TRPS1; 1.
DR PANTHER; PTHR47034:SF1; ZINC FINGER TRANSCRIPTION FACTOR TRPS1; 1.
DR Pfam; PF00320; GATA; 1.
DR Pfam; PF27058; Znf_C2H2_Trps1_1st; 1.
DR Pfam; PF27065; Znf_C2H2_Trps1_2nd; 1.
DR Pfam; PF27047; Znf_C2H2_Trps1_3rd; 1.
DR Pfam; PF27082; Znf_C2H2_Trps1_4th; 1.
DR Pfam; PF27088; Znf_C2H2_Trps1_5th; 1.
DR PRINTS; PR00619; GATAZNFINGER.
DR SMART; SM00355; ZnF_C2H2; 9.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000053872};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 702..730
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 900..958
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 26..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 135..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..408
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 872..895
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 971..1009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1049..1085
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1179..1206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 164..175
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 176..191
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 971..987
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 990..1005
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1050..1059
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1060..1069
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1070..1082
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1291 AA; 142997 MW; 7045773D39C1F1F5 CRC64;
MPYEVNAGYD FTNMVRKKNP PLRNVASEGE VQTLESTGTE SEECGRKKEF SAEQMQENTD
QADAAELNNK EELCTHVQEP SSSIKKDLKS SVLSEKAGFN YESHNKGGNV PSFPHDEVTD
RNMLAFSSPA VGGICEPLKS PQKSDADDTQ DVVCTPSGDA AETNEEHQMS PKASDETVQV
QSGQTDGQGS SPVPMASKNP QVPSDGGLRL NKSKADLLVN DNPDTAPLSP ELQDFKCNIC
GYGYYGNDPT DLIKHFRKYH LGLHNRTRQD AELDTKILAL HNMVQFSHSK DFQKVNRTVL
SGVLQDINSQ RPVMLNGTYD VQVTLGGTFI GIGRKTPDCQ GNTKYFRCKF CNFTYMGNSS
TELEQHFLQT HPNKMKAALP SSDSGKTSEK NSNKSSPTLR PCDSGDLGKW QDRITVKAGD
DTPVGYSVPI KPIDSSRQNG TDTTSYYWCK FCSFSCESSS SLKLLEHYSK QHGGSQAGSL
HPDLNDKLSR GSVINQNDLV KNTDGELVTK TEKGAKKKDL TSKGAEDSMV TSYNCQFCDF
RYSKSHGPDV IVVGPLLRHY QQLHNIHKCT IKHCQFCPRG LCSPEKHLGE ITYPFACRKS
NCSHCALLLL HLSPGVTGSS RVKHQCHQCS FSTPDVDVLL LHYENAHEAQ ASDVKPETNA
LPGAEGPLTL KENKEHSCTK CDFTTQVEEE ISRHYRRVHN CYKCRQCSFT AVDTQSLLEH
FNTVHCQEMD VTTANGEDSH SVSSIKEEPK IDLKVYSLIN PDPKMGEPIS DSIVKREKIE
EKEVLKEKGW TDSPSDDLRN VTWRGTDILR GSPSYTQTSL GLLTPASVGQ EQPKPLRDSP
NVEAAHLARP MYGLAVESKG FLQGVQAGAA EKGGQLPQPY PASGDSKAKD ESQSLLRRRR
GSGVFCANCL TTKTSLWRKN ANGGYVCNAC GLYQKLHSTP RPLNIIKQNN GEQIIRRRTR
KRLNPEALQA EQLNKQQRGS SEEQVNGSPL ERRSEDHLPE GHQREMQLPS LSKYEAPGSL
TKSHSAQQPI LVSQTLDIHK RMQPLHIQIK SPQESTGDPG NSSSISEGKG SSERGSPIEK
YMRPAKHPNY SPPGSPIEKY QYPLFGLPFV HNDFQSEADW LRFWSKYKLS VPGNPHYLSH
VPGLPNPCQN YVPYPTFNLP PHFSAVGSDN DIPLDLAIKH SRPGPTANGA SKEKSKAPPN
VKNEGPLNVV KTEKVDRSTQ DELSTKCVHC GIVFLDEVMY ALHMSCHGDS GPFQCSICQH
LCTDKYDFTT HIQRGLHRNN AQAEKNGKPK E
//
