ID A0A398AFP5_BRACM Unreviewed; 151 AA.
AC A0A398AFP5; M4DVL4;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 28-JAN-2026, entry version 30.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RID76612.1, ECO:0000313|EnsemblPlants:Bra020558.1-P};
GN ORFNames=BRAA02T08871Z {ECO:0000313|EMBL:VDC92528.1},
GN BRAPAZ1V2_A02P47230.2 {ECO:0000313|EMBL:CAG7895771.1}, BRARA_B03575
GN {ECO:0000313|EMBL:RID76612.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RID76612.1, ECO:0000313|Proteomes:UP000264353};
RN [1] {ECO:0000313|Proteomes:UP000011750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|Proteomes:UP000011750};
RX PubMed=21873998; DOI=10.1038/ng.919;
RG Brassica rapa Genome Sequencing Project Consortium;
RA Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B., Hayward A.,
RA Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B., Liu B., Tong C.,
RA Song C., Duran C., Peng C., Geng C., Koh C., Lin C., Edwards D., Mu D.,
RA Shen D., Soumpourou E., Li F., Fraser F., Conant G., Lassalle G.,
RA King G.J., Bonnema G., Tang H., Wang H., Belcram H., Zhou H., Hirakawa H.,
RA Abe H., Guo H., Wang H., Jin H., Parkin I.A., Batley J., Kim J.S., Just J.,
RA Li J., Xu J., Deng J., Kim J.A., Li J., Yu J., Meng J., Wang J., Min J.,
RA Poulain J., Wang J., Hatakeyama K., Wu K., Wang L., Fang L., Trick M.,
RA Links M.G., Zhao M., Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q.,
RA Huang Q., Li R., Tabata S., Cheng S., Zhang S., Zhang S., Huang S.,
RA Sato S., Sun S., Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X.,
RA Xu X., Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT "The genome of the mesopolyploid crop species Brassica rapa.";
RL Nat. Genet. 43:1035-1039(2011).
RN [2] {ECO:0000313|Proteomes:UP000011750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|Proteomes:UP000011750};
RX PubMed=30131865;
RA Zhang L., Cai X., Wu J., Liu M., Grob S., Cheng F., Liang J., Cai C.,
RA Liu Z., Liu B., Wang F., Li S., Liu F., Li X., Cheng L., Yang W., Li M.H.,
RA Grossniklaus U., Zheng H., Wang X.;
RT "Improved Brassica rapa reference genome by single-molecule sequencing and
RT chromosome conformation capture technologies.";
RL Hortic Res 5:50-50(2018).
RN [3] {ECO:0000313|EMBL:RID76612.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:VDC92528.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EnsemblPlants:Bra020558.1-P}
RP IDENTIFICATION.
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra020558.1-P};
RG EnsemblPlants;
RL Submitted (MAR-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; LS974618; CAG7895771.1; -; Genomic_DNA.
DR EMBL; CM010629; RID76612.1; -; Genomic_DNA.
DR EMBL; LR031573; VDC92528.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A398AFP5; -.
DR SMR; A0A398AFP5; -.
DR STRING; 51351.M4DVL4; -.
DR EnsemblPlants; Bra020558.1; Bra020558.1-P; Bra020558.
DR Gramene; A02p47230.2_BraZ1; A02p47230.2_BraZ1.CDS.1; A02g47230.2_BraZ1.
DR Gramene; Bra020558.1; Bra020558.1-P; Bra020558.
DR eggNOG; ENOG502R1M8; Eukaryota.
DR HOGENOM; CLU_1689129_0_0_1; -.
DR OMA; MVIGMYW; -.
DR OrthoDB; 1915967at2759; -.
DR Proteomes; UP000011750; Chromosome A02.
DR Proteomes; UP000264353; Chromosome A2.
DR Proteomes; UP000694005; Chromosome A02.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR InterPro; IPR051442; B3_domain.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR34269:SF5; GENOME ASSEMBLY, CHROMOSOME: A02; 1.
DR PANTHER; PTHR34269; TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
SQ SEQUENCE 151 AA; 17879 MW; 7CF45E6C028D60AC CRC64;
MIKTMFYTFF RTKHQEENAN NDQLLPQEID IRPITPDPWD ITKNLSPHEV WYGGKLQLPM
LYIKATILRH IPDVMYLAHM SIIAHFDVKV NDLDTNTVHT LSFWKDIHED NFATSETWIE
EFVKRRSLVA GMVIGMYWDF NVNMLCFSVL E
//
