ID A0A3M6TDP4_POCDA Unreviewed; 767 AA.
AC A0A3M6TDP4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 02-APR-2025, entry version 21.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RMX39500.1};
GN ORFNames=pdam_00015420 {ECO:0000313|EMBL:RMX39500.1};
OS Pocillopora damicornis (Cauliflower coral) (Millepora damicornis).
OC Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
OC Astrocoeniina; Pocilloporidae; Pocillopora.
OX NCBI_TaxID=46731 {ECO:0000313|EMBL:RMX39500.1, ECO:0000313|Proteomes:UP000275408};
RN [1] {ECO:0000313|EMBL:RMX39500.1, ECO:0000313|Proteomes:UP000275408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RSMAS {ECO:0000313|EMBL:RMX39500.1};
RC TISSUE=Whole animal {ECO:0000313|EMBL:RMX39500.1};
RX PubMed=30382153; DOI=10.1038/s41598-018-34459-8;
RA Cunning R., Bay R.A., Gillette P., Baker A.C., Traylor-Knowles N.;
RT "Comparative analysis of the Pocillopora damicornis genome highlights role
RT of immune system in coral evolution.";
RL Sci. Rep. 8:16134-16134(2018).
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RMX39500.1}.
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DR EMBL; RCHS01003811; RMX39500.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3M6TDP4; -.
DR STRING; 46731.A0A3M6TDP4; -.
DR EnsemblMetazoa; XM_027195985.1; XP_027051786.1; LOC113679048.
DR OrthoDB; 6144055at2759; -.
DR Proteomes; UP000275408; Unassembled WGS sequence.
DR GO; GO:0000151; C:ubiquitin ligase complex; IEA:TreeGrafter.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0043130; F:ubiquitin binding; IEA:TreeGrafter.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IEA:TreeGrafter.
DR GO; GO:0097039; P:protein linear polyubiquitination; IEA:TreeGrafter.
DR CDD; cd20335; BRcat_RBR; 1.
DR CDD; cd16448; RING-H2; 1.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR056245; KH_DEAH11/12.
DR InterPro; IPR051628; LUBAC_E3_Ligases.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR044066; TRIAD_supradom.
DR PANTHER; PTHR22770:SF13; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR22770; UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED; 1.
DR Pfam; PF01485; IBR; 1.
DR Pfam; PF24471; KH_DEAH11; 1.
DR SMART; SM00647; IBR; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF57850; RING/U-box; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS51873; TRIAD; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000275408};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 269..376
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 613..767
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
SQ SEQUENCE 767 AA; 86353 MW; 509BB5EBF00265DB CRC64;
MISTGALKYD LENLLSTVLT EMVVPCSTEL MKLTFEGCRG GNLNQIERKI AKSCDDSLVV
LEEDRVRGQI KVFVPPKYTA KALSMMESIL EESRKILRSE EREEPLKEES LGNRIVWGQG
GEIYEVLMPD MYRTVTVDEI EDGNAVAVLD HLKTFGDVVR HSFKEQNGKM GIFVTFKRSK
DAINAVKSSS NSSLETDVKV KPGFMMSSSI QRSVSPFEAK AKWIRRRGKG TASVEFHNCQ
DFYRTLGRIS SLMIKSEVII FQTDKVREHQ IFLKGLHPDT SEEDVRSAIE ERLPVVKVKK
VYISRTSEFE TPARTIYAQR ASLQERLSVL ATEGQFSIDL KKPSPKDFEG YAYLSFQDPE
EGQAAIRALN GTHVPGIGVV TLHPNHATVL LCDRNVYAAI RGEFEETIDT LDVTFNTRLN
VKVKDQPKHK RVVIQIQSNC TEHFICTSTA LTKIVNGDEI DCKISKNLEI LLTNSAKDVL
QTIERDSRTV INQDWKNEVV RIYGPKINRE SAKQAINKFL DDSIAGNSHS WQIYLRGPNK
PRGLLKALFI RFGANLQGLR DINGVQKIHV EFRNHVLIIE SSDEAEKLIN SYVEECCKNP
PQELFPVQQD HETQLICGVC LCNLDTKAGV YRLACCGHAY DKSCVIQQLK SPEFPLKCVM
EQCGEPLVWK DLRNLLNDRE RKRLALTALG EYVKKNPEIV KYCPTAGCDM VYCVSTDERP
FTCDACLAQT CTSCHVQWHS GLTCAEFKSE VQAGGTSPGV DDEGPKK
//
