ID A0A3N7F0J2_POPTR Unreviewed; 2098 AA.
AC A0A3N7F0J2;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 08-OCT-2025, entry version 20.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=POPTR_005G182900 {ECO:0000313|EMBL:RQO90719.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQO90719.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQO90719.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; RQO90719.1; -; Genomic_DNA.
DR Proteomes; UP000006729; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-ARBA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1864..1893
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1919..1945
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1968..1996
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1864..1893
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1919..1945
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1968..1996
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 160..224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 959..1005
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1342..1377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1408..1442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1456..1475
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1981..2009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..78
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..113
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..211
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1342..1352
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1362..1375
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1418..1431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1432..1442
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1989..2005
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2098 AA; 231138 MW; 13FD18BB3B31317A CRC64;
MEYHKYDPNA RASRKSKDRT IATTAMTPPS SYFHYTKYAK HSSPTPSPRY PNNLNFHHHS
NFLEPPPPPQ TPPPPPSFPQ FSSRNPHFSY NPSPNHPQIH DNYNHQRSHH DLPHSTQLPW
VSHQLYDDRQ PPRRLPEFDH CVHEPRPDFT FLRDDHMQTR HELEGDPNPN SRLVQDRNVV
TDGESEHRRR RGEFGSNSDR SSSSVFRTVS NQLRGFKSNS GNYENRRRLN YDYHEKGSAN
QRWVHDREVM GESRDSLIEL GSNEIGDGEN RILAGKREHY RIRDGNLELE RNGGKRSREG
SYEFNRTPRK QLQKKSALLR LQKPSYRNRE DKRVHYSSYA DYTKSSPFRG KHQESGFLRG
KDKDKVLHAD RGMVEGARER SPVELDVSFK SNSLVAKAIL TPTLSSAGAS EMNLTPRNRK
VRKVLVPAKD MDSLNSSMHK LNKVALGLDE AASVANKTSS SNKELKKSKE VVTASGITNV
RDSSSLPMKR TVSLGSGTNL VSGKTSSLKG GKKKKVVKRV VKKVVNHKST LSSSQPTKTC
DEPVKADSFA YNPTEPIDPD KAATVADIVD PQPCPNEATA MPKNDKVERF DKFMESGLVG
AGADSGNLFV FNINGNKSRS ASPSGFSNHE ETKFGESFIN GDCDKGLHAI ADTENSLKKS
LDETFRSDIG GVEDVSKQPC QNGDSCLFED NAVSGSLKVL DYMEGNTDFG SLSSEKTIIH
EGPMNTCMPL MGLDTASMNS QERITVFDAG ASDVGCKEPC RNLGSPSAEN GITDLLQGAS
FPVVNNRSFS VSISGETGIQ NDVIRPNQGV GAILVSPSCC TNSEEINISV HGTGDDFSEQ
LSQDGVTKTL ESASIGGSLD TKVSAGGSDE DATDITKNDK KIEVPQLDLS RTDVSYMHLD
PANMVTSTTA HWVDKTLRLC FEDSATAECT FSGSQFVDVG SQSCNIVSVL HEGSLTDVSA
GRDSVRRSDD VGPSNVSPRN EKNRKFSAPQ LELNSPQESD ADEGTVFAGN STSGMEVPSN
SGDGQTLPEE EAVVSDMDFL CTSDFLPAQK RITASLENCS AGEHTVAAVK DAFEDDGQKD
VKSHFAVEEL AVTKVTSRDL VVLGGKDIIN ATPVVVGSSN PNDSMDVDAG EGDKMDINAA
EEQVVIDGGI DPCQIPSKLQ TQVLTEKLPR IDVEDSDFHG VKNNSPCMSN NLSSFEDGFG
VSTINSSEEL MAFVPETLSD RGFPETLPDV LGTSLSKNPV EKVHGYHDKI LAERPAINVG
SNSSICTTSS QSGKIVLKSD HAVEGDRLLA RRTGHFPSQD SKITTRTQNA VSGQLYGRKN
QTNCAVSEIY PGRSSFVFTA SKSTASSSRN SKTQTWHRTD SSSDSAPPAK KAFSSTVHAQ
MQFPRKTDKL QSTSYIRKGN SLVRKPISVA QSPDPHGLSS SVYQLNSSGT NEPKKSTGSD
SRIDIVDPLD VVRKGGMNAS CERPKTPPLS SVPKIPNQAT NALGVRVSSP LAEHLHSLST
ETATASAEFM ESNDVPKSSD NLLKISESPI TQNSQINNLE CNGDLNEDNK VVLANVKNLT
YVKRKSNQLV ATSNPCASSV QNACNTSSSD SYYKRRRNQL IRTSLESQVK QTTSIPDESL
NSEGQTALYS FFSGNFSKRR LRKVLTKTHK PSKFSLVWTL HGAQLSKNDG DSLHHGKVLS
HLFPWKRATY WRSFLPKPSS ISNHSSLSSI GRKLLLLRKR NTVYTRSKHG FSLRKSKEAT
LAVAAVERKN RERRGAAHVA SPTKSRNSSS RERIFRVGLV RYKMDSSKRT LQRISGDESS
CSGALQKEKD AKKSYVPRRL MIGKDEYVRI GNGNQLIRDP KKRTRILASE KVRWSLHTAR
SRLARKRKYC QFFSRFGKCN KDDGKCPFIH DSSKIAVCTK FLNGLCFNPE CKLTHKVIPE
RMPDCSYFLQ GLCTNKDCPY RHVRVNPNAS ICEGFLRGYC ADVNECLKKH SYVCPTYEAT
GSCPQGSKCK LHHPKNRSKE KKSKRSRDNN AQGRYFGLMH ASTTELRNPV PGKLNVLDND
AISFKGSIAD YISLDVIDEV VENTIPADEH TALGDSDPLE LQLGDLDELI KPVRIMNI
//
