ID A0A3N7F5X4_POPTR Unreviewed; 2122 AA.
AC A0A3N7F5X4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 08-OCT-2025, entry version 20.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=POPTR_005G182900 {ECO:0000313|EMBL:RQO90720.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQO90720.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQO90720.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; RQO90720.1; -; Genomic_DNA.
DR FunCoup; A0A3N7F5X4; 1124.
DR STRING; 3694.A0A3N7F5X4; -.
DR InParanoid; A0A3N7F5X4; -.
DR Proteomes; UP000006729; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1888..1917
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1943..1969
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1992..2020
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1888..1917
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1943..1969
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1992..2020
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 160..224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 959..1005
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1342..1377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1408..1442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1456..1475
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2005..2033
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..78
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..113
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..211
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1342..1352
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1362..1375
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1418..1431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1432..1442
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2013..2029
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2122 AA; 233822 MW; 3C4BA81C95E960D8 CRC64;
MEYHKYDPNA RASRKSKDRT IATTAMTPPS SYFHYTKYAK HSSPTPSPRY PNNLNFHHHS
NFLEPPPPPQ TPPPPPSFPQ FSSRNPHFSY NPSPNHPQIH DNYNHQRSHH DLPHSTQLPW
VSHQLYDDRQ PPRRLPEFDH CVHEPRPDFT FLRDDHMQTR HELEGDPNPN SRLVQDRNVV
TDGESEHRRR RGEFGSNSDR SSSSVFRTVS NQLRGFKSNS GNYENRRRLN YDYHEKGSAN
QRWVHDREVM GESRDSLIEL GSNEIGDGEN RILAGKREHY RIRDGNLELE RNGGKRSREG
SYEFNRTPRK QLQKKSALLR LQKPSYRNRE DKRVHYSSYA DYTKSSPFRG KHQESGFLRG
KDKDKVLHAD RGMVEGARER SPVELDVSFK SNSLVAKAIL TPTLSSAGAS EMNLTPRNRK
VRKVLVPAKD MDSLNSSMHK LNKVALGLDE AASVANKTSS SNKELKKSKE VVTASGITNV
RDSSSLPMKR TVSLGSGTNL VSGKTSSLKG GKKKKVVKRV VKKVVNHKST LSSSQPTKTC
DEPVKADSFA YNPTEPIDPD KAATVADIVD PQPCPNEATA MPKNDKVERF DKFMESGLVG
AGADSGNLFV FNINGNKSRS ASPSGFSNHE ETKFGESFIN GDCDKGLHAI ADTENSLKKS
LDETFRSDIG GVEDVSKQPC QNGDSCLFED NAVSGSLKVL DYMEGNTDFG SLSSEKTIIH
EGPMNTCMPL MGLDTASMNS QERITVFDAG ASDVGCKEPC RNLGSPSAEN GITDLLQGAS
FPVVNNRSFS VSISGETGIQ NDVIRPNQGV GAILVSPSCC TNSEEINISV HGTGDDFSEQ
LSQDGVTKTL ESASIGGSLD TKVSAGGSDE DATDITKNDK KIEVPQLDLS RTDVSYMHLD
PANMVTSTTA HWVDKTLRLC FEDSATAECT FSGSQFVDVG SQSCNIVSVL HEGSLTDVSA
GRDSVRRSDD VGPSNVSPRN EKNRKFSAPQ LELNSPQESD ADEGTVFAGN STSGMEVPSN
SGDGQTLPEE EAVVSDMDFL CTSDFLPAQK RITASLENCS AGEHTVAAVK DAFEDDGQKD
VKSHFAVEEL AVTKVTSRDL VVLGGKDIIN ATPVVVGSSN PNDSMDVDAG EGDKMDINAA
EEQVVIDGGI DPCQIPSKLQ TQVLTEKLPR IDVEDSDFHG VKNNSPCMSN NLSSFEDGFG
VSTINSSEEL MAFVPETLSD RGFPETLPDV LGTSLSKNPV EKVHGYHDKI LAERPAINVG
SNSSICTTSS QSGKIVLKSD HAVEGDRLLA RRTGHFPSQD SKITTRTQNA VSGQLYGRKN
QTNCAVSEIY PGRSSFVFTA SKSTASSSRN SKTQTWHRTD SSSDSAPPAK KAFSSTVHAQ
MQFPRKTDKL QSTSYIRKGN SLVRKPISVA QSPDPHGLSS SVYQLNSSGT NEPKKSTGSD
SRIDIVDPLD VVRKGGMNAS CERPKTPPLS SVPKIPNQAT NALGVRVSSP LAEHLHSLST
ETATASAEFM ESNDVPKSSD NLLKISESPI TQNSQINNLE CNGDLNEDNK VVLANVKNLT
YVKRKSNQLV ATSNPCASSV QNACNTSSSD SYYKRRRNQL IRTSLESQVK QTTSIPDESL
NSEGQTALYS FFSGNFSKRR LRKVLTKTHK PSKFSLVWTL HGAQLSKNDG DSLHHGKVLS
HLFPWKRATY WRSFLPKPSS ISNHSSLSSI GRKLLLLRKR NTVYTRSKHG FSLRKSKVLS
FGGSSLKWSK SIERYSKKAN EEATLAVAAV ERKNRERRGA AHVASPTKSR NSSSRERIFR
VGLVRYKMDS SKRTLQRISG DESSCSGALQ KEKDAKKSYV PRRLMIGKDE YVRIGNGNQL
IRDPKKRTRI LASEKVRWSL HTARSRLARK RKYCQFFSRF GKCNKDDGKC PFIHDSSKIA
VCTKFLNGLC FNPECKLTHK VIPERMPDCS YFLQGLCTNK DCPYRHVRVN PNASICEGFL
RGYCADVNEC LKKHSYVCPT YEATGSCPQG SKCKLHHPKN RSKEKKSKRS RDNNAQGRYF
GLMHASTTEL RNPVPGKLNV LDNDAISFKG SIADYISLDV IDEVVENTIP ADEHTALGDS
DPLELQLGDL DELIKPVRIM NI
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