ID A0A3N7FW99_POPTR Unreviewed; 2121 AA.
AC A0A3N7FW99;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 08-OCT-2025, entry version 20.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=POPTR_005G182900 {ECO:0000313|EMBL:RQO90721.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQO90721.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQO90721.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; RQO90721.1; -; Genomic_DNA.
DR Proteomes; UP000006729; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-ARBA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1887..1916
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1942..1968
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1991..2019
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1887..1916
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1942..1968
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1991..2019
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 160..224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 959..1005
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1342..1377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1408..1442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1456..1475
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2004..2032
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..78
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..113
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..211
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1342..1352
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1362..1375
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1418..1431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1432..1442
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2012..2028
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2121 AA; 233666 MW; AA505EDB3E2F0F83 CRC64;
MEYHKYDPNA RASRKSKDRT IATTAMTPPS SYFHYTKYAK HSSPTPSPRY PNNLNFHHHS
NFLEPPPPPQ TPPPPPSFPQ FSSRNPHFSY NPSPNHPQIH DNYNHQRSHH DLPHSTQLPW
VSHQLYDDRQ PPRRLPEFDH CVHEPRPDFT FLRDDHMQTR HELEGDPNPN SRLVQDRNVV
TDGESEHRRR RGEFGSNSDR SSSSVFRTVS NQLRGFKSNS GNYENRRRLN YDYHEKGSAN
QRWVHDREVM GESRDSLIEL GSNEIGDGEN RILAGKREHY RIRDGNLELE RNGGKRSREG
SYEFNRTPRK QLQKKSALLR LQKPSYRNRE DKRVHYSSYA DYTKSSPFRG KHQESGFLRG
KDKDKVLHAD RGMVEGARER SPVELDVSFK SNSLVAKAIL TPTLSSAGAS EMNLTPRNRK
VRKVLVPAKD MDSLNSSMHK LNKVALGLDE AASVANKTSS SNKELKKSKE VVTASGITNV
RDSSSLPMKR TVSLGSGTNL VSGKTSSLKG GKKKKVVKRV VKKVVNHKST LSSSQPTKTC
DEPVKADSFA YNPTEPIDPD KAATVADIVD PQPCPNEATA MPKNDKVERF DKFMESGLVG
AGADSGNLFV FNINGNKSRS ASPSGFSNHE ETKFGESFIN GDCDKGLHAI ADTENSLKKS
LDETFRSDIG GVEDVSKQPC QNGDSCLFED NAVSGSLKVL DYMEGNTDFG SLSSEKTIIH
EGPMNTCMPL MGLDTASMNS QERITVFDAG ASDVGCKEPC RNLGSPSAEN GITDLLQGAS
FPVVNNRSFS VSISGETGIQ NDVIRPNQGV GAILVSPSCC TNSEEINISV HGTGDDFSEQ
LSQDGVTKTL ESASIGGSLD TKVSAGGSDE DATDITKNDK KIEVPQLDLS RTDVSYMHLD
PANMVTSTTA HWVDKTLRLC FEDSATAECT FSGSQFVDVG SQSCNIVSVL HEGSLTDVSA
GRDSVRRSDD VGPSNVSPRN EKNRKFSAPQ LELNSPQESD ADEGTVFAGN STSGMEVPSN
SGDGQTLPEE EAVVSDMDFL CTSDFLPAQK RITASLENCS AGEHTVAAVK DAFEDDGQKD
VKSHFAVEEL AVTKVTSRDL VVLGGKDIIN ATPVVVGSSN PNDSMDVDAG EGDKMDINAA
EEQVVIDGGI DPCQIPSKLQ TQVLTEKLPR IDVEDSDFHG VKNNSPCMSN NLSSFEDGFG
VSTINSSEEL MAFVPETLSD RGFPETLPDV LGTSLSKNPV EKVHGYHDKI LAERPAINVG
SNSSICTTSS QSGKIVLKSD HAVEGDRLLA RRTGHFPSQD SKITTRTQNA VSGQLYGRKN
QTNCAVSEIY PGRSSFVFTA SKSTASSSRN SKTQTWHRTD SSSDSAPPAK KAFSSTVHAQ
MQFPRKTDKL QSTSYIRKGN SLVRKPISVA QSPDPHGLSS SVYQLNSSGT NEPKKSTGSD
SRIDIVDPLD VVRKGGMNAS CERPKTPPLS SVPKIPNQAT NALGVRVSSP LAEHLHSLST
ETATASAEFM ESNDVPKSSD NLLKISESPI TQNSQINNLE CNGDLNEDNK VVLANVKNLT
YVKRKSNQLV ATSNPCASSV QNACNTSSSD SYYKRRRNQL IRTSLESQVK QTTSIPDESL
NSEGQTALYS FFSGNFSKRR LRKVLTKTHK PSKFSLVWTL HGAQLSKNDG DSLHHGKVLS
HLFPWKRATY WRSFLPKPSS ISNHSSLSSI GKLLLLRKRN TVYTRSKHGF SLRKSKVLSF
GGSSLKWSKS IERYSKKANE EATLAVAAVE RKNRERRGAA HVASPTKSRN SSSRERIFRV
GLVRYKMDSS KRTLQRISGD ESSCSGALQK EKDAKKSYVP RRLMIGKDEY VRIGNGNQLI
RDPKKRTRIL ASEKVRWSLH TARSRLARKR KYCQFFSRFG KCNKDDGKCP FIHDSSKIAV
CTKFLNGLCF NPECKLTHKV IPERMPDCSY FLQGLCTNKD CPYRHVRVNP NASICEGFLR
GYCADVNECL KKHSYVCPTY EATGSCPQGS KCKLHHPKNR SKEKKSKRSR DNNAQGRYFG
LMHASTTELR NPVPGKLNVL DNDAISFKGS IADYISLDVI DEVVENTIPA DEHTALGDSD
PLELQLGDLD ELIKPVRIMN I
//
