ID A0A3N9UEN6_9BACI Unreviewed; 447 AA.
AC A0A3N9UEN6;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 18-JUN-2025, entry version 29.
DE SubName: Full=PAS domain S-box protein {ECO:0000313|EMBL:RQW74694.1};
GN ORFNames=EBB45_10730 {ECO:0000313|EMBL:RQW74694.1};
OS Lysinibacillus composti.
OC Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
OC Lysinibacillus.
OX NCBI_TaxID=720633 {ECO:0000313|EMBL:RQW74694.1, ECO:0000313|Proteomes:UP000274033};
RN [1] {ECO:0000313|EMBL:RQW74694.1, ECO:0000313|Proteomes:UP000274033}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MCCC 1A12701 {ECO:0000313|EMBL:RQW74694.1,
RC ECO:0000313|Proteomes:UP000274033};
RX PubMed=23812821; DOI=10.1007/s12275-013-2664-1;
RA Kim S.J., Jang Y.H., Hamada M., Ahn J.H., Weon H.Y., Suzuki K., Whang K.S.,
RA Kwon S.W.;
RT "Lysinibacillus chungkukjangi sp. nov., isolated from Chungkukjang, Korean
RT fermented soybean food.";
RL J. Microbiol. 51:400-404(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RQW74694.1}.
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DR EMBL; RRCT01000008; RQW74694.1; -; Genomic_DNA.
DR RefSeq; WP_124764541.1; NZ_JAFBDY010000007.1.
DR AlphaFoldDB; A0A3N9UEN6; -.
DR OrthoDB; 9771372at2; -.
DR Proteomes; UP000274033; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR009057; Homeodomain-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF14532; Sigma54_activ_2; 1.
DR PRINTS; PR01590; HTHFIS.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000274033};
KW Transcription {ECO:0000256|ARBA:ARBA00023015};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 13..48
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 139..342
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 447 AA; 51940 MW; 31BD582A29720477 CRC64;
MQHETLLDIY KFIVEKGDNG ICVVDNTGKL IIYNKKMREL QGISDEEFEK RRALEIVGFN
TEKGGLLRVL QDEQPILNEK KTFWNQKGQE VTLISNIYPL YSQDVLVGAV EFARDITQQE
YMMYQPLRRY NEPLTFEIIT AISTEMKKVI EKAKIVAYSR MPVILVGESG TGIDMIAEGI
HHELKDKNDM FITLICRRDE ASVISQLEKY IVEKKNITFF AERIEYLSKE AQEKIVELLA
NHTNHHHIFI ASVGEDPFDL IQKGQLSKAL YRHFSDISIY IPALRNRKED IMPFVEDYFK
RHRESYGSAI SGLSDEVKEI FLNYNWPGNL KELEVLLDDI SSLITTESLV EAHMLPAHFK
WKIQNIESPE NQDIAQSDIF VVMNKNELRP LDVYMNEVED YYISRALELF DGNVSKTATA
LGIKRQSLQY RIRKYTESRS SSDKHEE
//
