ID A0A4U1C1X3_9SPHI Unreviewed; 440 AA.
AC A0A4U1C1X3;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 02-APR-2025, entry version 18.
DE SubName: Full=DEAD/DEAH box helicase {ECO:0000313|EMBL:TKB99004.1};
GN ORFNames=FA046_07785 {ECO:0000313|EMBL:TKB99004.1};
OS Pedobacter cryophilus.
OC Bacteria; Pseudomonadati; Bacteroidota; Sphingobacteriia;
OC Sphingobacteriales; Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=2571271 {ECO:0000313|EMBL:TKB99004.1, ECO:0000313|Proteomes:UP000308181};
RN [1] {ECO:0000313|EMBL:TKB99004.1, ECO:0000313|Proteomes:UP000308181}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AR-3-17 {ECO:0000313|EMBL:TKB99004.1,
RC ECO:0000313|Proteomes:UP000308181};
RA Dahal R.H., Kim D.-U.;
RT "Pedobacter sp. AR-3-17 sp. nov., isolated from Arctic soil.";
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|ARBA:ARBA00038437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TKB99004.1}.
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DR EMBL; SWBP01000002; TKB99004.1; -; Genomic_DNA.
DR RefSeq; WP_136825816.1; NZ_SWBP01000002.1.
DR AlphaFoldDB; A0A4U1C1X3; -.
DR OrthoDB; 9762011at2; -.
DR Proteomes; UP000308181; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:TreeGrafter.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:TreeGrafter.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR050079; DEAD_box_RNA_helicase.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C-like.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47959:SF1; ATP-DEPENDENT RNA HELICASE DBPA; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF03880; DbpA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:TKB99004.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:TKB99004.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000308181}.
FT DOMAIN 27..195
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 217..371
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 440 AA; 49621 MW; A78B1E1FECCE0C6C CRC64;
MINTEEKAQL LKRLNIAQLN EMQIAAEKAI QSNKDVMVLS ATGSGKTLAF LIPLLYRLKK
DAKQAQVLVI VPSRELALQI EQVFRAFQSG FKVSCIYGGH STKTEEQSLS VTPEVIIGTP
GKISYHIRKE NINPQELEYL VLDEFDKSLE MGFQVEMEFI IENLTNVKQK ILTSATKMDE
IPLFARVNNL ATVNFLNDDA HAPELALRVL HTPSKDKLKL LMQVVAEHPD GPTLIFCNHR
EAVDRVSEIL WDKGMSNGIY HGGMDQPERE KALVKFRNGT HAVLVTTDLA SRGLDIPDVQ
QVIHYQIPFT EESFTHRNGR TARMKATGKA YLLLADDEYC PGYINQKVEE IANIPDFKLF
DASKWATLYI AAGKKDKINK IDIVGLLHKK ANLEKEDIGL IEVFDHMSYV AVLRKKINQA
LGLIRPEKIK GKKYKIGIDE
//
