ID A0A4U8UD98_9HELI Unreviewed; 607 AA.
AC A0A4U8UD98;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 28-JAN-2026, entry version 26.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:TLE15599.1};
GN Name=selB {ECO:0000313|EMBL:TLE15599.1};
GN ORFNames=LS72_006580 {ECO:0000313|EMBL:TLE15599.1};
OS Helicobacter apodemus.
OC Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
OC Campylobacterales; Helicobacteraceae; Helicobacter.
OX NCBI_TaxID=135569 {ECO:0000313|EMBL:TLE15599.1, ECO:0000313|Proteomes:UP000029920};
RN [1] {ECO:0000313|EMBL:TLE15599.1, ECO:0000313|Proteomes:UP000029920}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MIT-03-7007 {ECO:0000313|EMBL:TLE15599.1,
RC ECO:0000313|Proteomes:UP000029920};
RX PubMed=25428971;
RA Sheh A., Shen Z., Fox J.G.;
RT "Draft genome sequences of eight enterohepatic helicobacter species
RT isolated from both laboratory and wild rodents.";
RL Genome Announc. 2:e01218-e01214(2014).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TLE15599.1}.
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DR EMBL; JRPC02000015; TLE15599.1; -; Genomic_DNA.
DR RefSeq; WP_034554168.1; NZ_JRPC02000015.1.
DR AlphaFoldDB; A0A4U8UD98; -.
DR Proteomes; UP000029920; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd03696; SelB_II; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:TLE15599.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000029920}.
FT DOMAIN 2..171
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 607 AA; 68717 MW; 2BEC2FAE78BD5071 CRC64;
MQDNVILGSI GHIDHGKTSL IAALNGFWGD EREDEQKRGI TLDLSFSNLS NGIKNIAFID
VPGHERLVKN MIAGAFGIDY ALLVIASNEG IKPQTLEHLK ITYLLGIKEF LVILTKTDLA
SKNTIAAIKL QIKELFSHYN LNYSIFECSI YDNASIQALK EALFLLPKKL HRDLGCFRYY
IDRAFAIKGS GCVVSGTLLD GNLNVEQKIW CCNLQKSLGI KNIQSHNAFI KEAKSGQRIA
INLAGISHNA LKRGYLLTKK GYLRGFNAVE VCLDLHENIT HNSEVLVFIG SLKCKGKVLF
LKNHPKYATL KCDRAIFSAF GERFILRDEN KTLGGGKILS PIGDPMKKKQ KLAFLESLDK
EDFKTAFSIL LSAHKKGFGL ISTMQRFGIP QSEAINIASE IQDCFVSTKH LVAYGKQTEQ
ILEKIIHNIL DKNPNALLSP ALLSQKHAWI VEDFAKMVLE TMHQRGLLNK EESFYISLSF
KENIQDYLYK SIYETLQMQG FEPIAPYNLY ESLDIDRATG NLVLKQLTRE KKVIRLNHKL
FISAQSLSQL LALMRKILQD EGYLELNNLK NHLNLSRKYL ITYLDYLDSF SDIINKEGRR
FKKDQLC
//
