ID A0A5A9N4Q8_9TELE Unreviewed; 512 AA.
AC A0A5A9N4Q8;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 05-FEB-2025, entry version 14.
DE SubName: Full=Synaptonemal complex protein 2-like {ECO:0000313|EMBL:KAA0705004.1};
GN ORFNames=E1301_Tti000680 {ECO:0000313|EMBL:KAA0705004.1};
OS Triplophysa tibetana.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Nemacheilidae; Triplophysa.
OX NCBI_TaxID=1572043 {ECO:0000313|EMBL:KAA0705004.1, ECO:0000313|Proteomes:UP000324632};
RN [1] {ECO:0000313|EMBL:KAA0705004.1, ECO:0000313|Proteomes:UP000324632}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TTIB1903HZAU {ECO:0000313|EMBL:KAA0705004.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:KAA0705004.1};
RX PubMed=30977968;
RA Yang X., Liu H., Ma Z., Zou Y., Zou M., Mao Y., Li X., Wang H., Chen T.,
RA Wang W., Yang R.;
RT "Chromosome-level genome assembly of Triplophysa tibetana, a fish adapted
RT to the harsh high-altitude environment of the Tibetan Plateau.";
RL Mol. Ecol. Resour. 19:1027-1036(2019).
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SYCP2 family.
CC {ECO:0000256|ARBA:ARBA00007960}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAA0705004.1}.
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DR EMBL; SOYY01000022; KAA0705004.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5A9N4Q8; -.
DR Proteomes; UP000324632; Chromosome 22.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR024835; SYCP2-like.
DR InterPro; IPR041322; SYCP2_ARLD.
DR InterPro; IPR040560; SYCP2_SLD.
DR PANTHER; PTHR15607:SF18; SYNAPTONEMAL COMPLEX PROTEIN 2-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR15607; SYNAPTONEMAL COMPLEX PROTEIN-RELATED; 1.
DR Pfam; PF18581; SYCP2_ARLD; 1.
DR Pfam; PF18584; SYCP2_SLD; 1.
PE 3: Inferred from homology;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000324632}.
FT DOMAIN 5..147
FT /note="Synaptonemal complex protein 2 armadillo-repeat-
FT like"
FT /evidence="ECO:0000259|Pfam:PF18581"
FT DOMAIN 163..273
FT /note="Synaptonemal complex protein 2 Spt16M-like"
FT /evidence="ECO:0000259|Pfam:PF18584"
FT REGION 294..316
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..304
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 512 AA; 58904 MW; 84F80958BD6E9615 CRC64;
MTVIEEKSCV TLADRLDEVV TTELRRNGHK NVALILRALE HVIIKDEECI HKLVNHGLVV
KMLNWFERVS EHLKEQQKPT KIAIKLIEVF YEVSMSLCQM TSAGSYKILD VFLLRFGAVV
LDHEAPFSLR LEAIRTINSM LDSSPKDIRK RLCQSDDHIG LLVFSFPCIR VFLDSTELFK
PDDEFLTQFW VDFNIGTSTI SFFVNDPQNT LWELIHLCKD AISTYTLQER DEQEILTVNM
MNPISNGKIT GQKVEIIFSS DPNIQTALTR VFEEKLQPAP KRMRMMDSSE EFIRRDTPQI
DYSRKRSRSK GKLREPYGDL KRDQLLPRLK PKRLFKSMSL EDAAERVTKV LEDESEEELG
AGVRAAFNSF KTQLKAHFSS RYKRIEARSM QSLTDCQRNV TTLLGTVHSQ RLLHLDHFQN
SVVQQLECLE QDCLSLKAIE KETSNFWQSE SNTVRAFCDR QQKRLVSLTV PQESAVASYG
RSENQEAKVS LLADLEDSQC HSEQSNAEDL SS
//
