ID A0A5C1E9Y8_9RHOO Unreviewed; 965 AA.
AC A0A5C1E9Y8;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 02-APR-2025, entry version 16.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor {ECO:0000313|EMBL:QEL65505.1};
GN ORFNames=OTERR_20290 {ECO:0000313|EMBL:QEL65505.1};
OS Oryzomicrobium terrae.
OC Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
OC Rhodocyclales; Rhodocyclaceae; Oryzomicrobium.
OX NCBI_TaxID=1735038 {ECO:0000313|EMBL:QEL65505.1, ECO:0000313|Proteomes:UP000323671};
RN [1] {ECO:0000313|EMBL:QEL65505.1, ECO:0000313|Proteomes:UP000323671}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TPP412 {ECO:0000313|EMBL:QEL65505.1,
RC ECO:0000313|Proteomes:UP000323671};
RA Chiu L.-W., Lo K.-J., Tsai Y.-M., Lin S.-S., Kuo C.-H., Liu C.-T.;
RT "Complete genome sequence of Oryzomicrobium terrae TPP412.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004651};
CC Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
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DR EMBL; CP022579; QEL65505.1; -; Genomic_DNA.
DR RefSeq; WP_149425701.1; NZ_CP022579.1.
DR AlphaFoldDB; A0A5C1E9Y8; -.
DR KEGG; otr:OTERR_20290; -.
DR Proteomes; UP000323671; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR FunFam; 3.20.20.450:FF:000001; Cyclic di-GMP phosphodiesterase yahA; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR052155; Biofilm_reg_signaling.
DR InterPro; IPR004010; Double_Cache_2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR033480; sCache_2.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF08269; dCache_2; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM01049; Cache_2; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000323671};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..35
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 360..382
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 407..453
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 480..532
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 564..697
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 706..960
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 965 AA; 105539 MW; 685FC1E72B675D25 CRC64;
MSPPFFSRNL KHLPLAGMLV IVLTLCVGLG GYFTWQYART FRDNLNQLHQ ATQAQHQAQL
KTQADAARTD LNHTRALAEA RLRLRLQQEV EEGVSIAAAL YQQAQQRDSA ATRRLIADAL
RPVRFFAGRG YFFIYSEDGQ AILAPGEPTT EGHSVAGVHD DTGQSILASL RQAVANPEGA
GFVTYRWHAP GERELRHKIS YVRRFAPYGW LIGAGDFVDA VEMEMQQEAL ARLRTFPVLK
NGELLVMSRS GRLLLAQGLP ALEGLASQDM PSPELQAATA QLRDAAANGG GFVSHAWVKP
GTQVEEDGPP PPLTPHLAYV TPPDAWGWSL VSGIEQSVID AAETEQRADL EGQLARQGSA
IVLVLLVTVT VTMLFAIFYA RWLETLLRRY RQDSIEHTEA LEANAQDLRL AARVFESGNE
ALIVTDHTNA IVAVNAAFTQ ITGYSAAEVL GHNPRLLSSG YHDAEFYRQM WESITTTGTW
SGEIWNRRKD GSLYPEWLHI STLFDEHGQA THRVAAFSDV SERKAAEARV RYLSEYDSVT
SLPNRLLLEE RTNEAMIAAR RNHSGLTLCI LDLDRFKTIN DSLGHGVGNR VLHTVGERLV
EAAGENATVS RLGGDEFAVI FPGTAEEACA AAAATSLMNS LSQPLVVDGH ILAINCSVGV
ALFPGDGGDF DTLLRNADSA VNHAKETGRN RMQFYREEMN ARALERLSLE QALRRALEAQ
ELTLFYQGQF DLATGRLLGA EALLRWQHPE LGLVPPDRFI PIAEDTGLIL SIGRWVLVEA
CRRAASWQRP GQAPVTVAVN ISARQFHHGD LVAEVEHALA QSGLPAAQLE LEVTESVLMG
GIQPVIDTLD QLKAMGVRLA LDDFGTGYSS LAYLKRFPLD VLKVDRSFIR ALPQDQDDAA
IVAAILGMAG HLGLATVAEG VEDEAQRAHL LAQGCQVAQG YLFARPLPAE EFEARLGEAT
LTPAS
//
