ID A0A5C6EU73_9BACT Unreviewed; 351 AA.
AC A0A5C6EU73;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 02-APR-2025, entry version 18.
DE SubName: Full=Tyrosine recombinase XerD {ECO:0000313|EMBL:TWU51156.1};
GN Name=xerD_3 {ECO:0000313|EMBL:TWU51156.1};
GN ORFNames=Poly59_27460 {ECO:0000313|EMBL:TWU51156.1};
OS Rubripirellula reticaptiva.
OC Bacteria; Pseudomonadati; Planctomycetota; Planctomycetia; Pirellulales;
OC Pirellulaceae; Rubripirellula.
OX NCBI_TaxID=2528013 {ECO:0000313|EMBL:TWU51156.1, ECO:0000313|Proteomes:UP000317977};
RN [1] {ECO:0000313|EMBL:TWU51156.1, ECO:0000313|Proteomes:UP000317977}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Poly59 {ECO:0000313|EMBL:TWU51156.1,
RC ECO:0000313|Proteomes:UP000317977};
RA Wiegand S., Jogler M., Boedeker C., Pinto D., Vollmers J., Rivas-Marin E.,
RA Kohn T., Peeters S.H., Heuer A., Rast P., Oberbeckmann S., Bunk B.,
RA Jeske O., Meyerdierks A., Storesund J.E., Kallscheuer N., Luecker S.,
RA Lage O.M., Pohl T., Merkel B.J., Hornburger P., Mueller R.-W., Bruemmer F.,
RA Labrenz M., Spormann A.M., Op Den Camp H., Overmann J., Amann R.,
RA Jetten M.S.M., Mascher T., Medema M.H., Devos D.P., Kaster A.-K.,
RA Ovreas L., Rohde M., Galperin M.Y., Jogler C.;
RT "Deep-cultivation of Planctomycetes and their phenomic and genomic
RT characterization uncovers novel biology.";
RL Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TWU51156.1}.
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DR EMBL; SJPX01000003; TWU51156.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5C6EU73; -.
DR Proteomes; UP000317977; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR011946; Integrase_integron-type.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR InterPro; IPR050090; Tyrosine_recombinase_XerCD.
DR NCBIfam; TIGR02249; integrase_gron; 1.
DR PANTHER; PTHR30349; PHAGE INTEGRASE-RELATED; 1.
DR PANTHER; PTHR30349:SF64; PROPHAGE INTEGRASE INTD-RELATED; 1.
DR Pfam; PF13495; Phage_int_SAM_4; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000317977}.
FT DOMAIN 34..111
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 128..341
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 351 AA; 40226 MW; AD7970BB6A9F1252 CRC64;
MGRLERNVEL EAAPTAEELA KLRGNINRGE PPFIQTMRSE MRVLHYSAAT EKAYVRWVKR
FSGHVGSTQL DQFGEKDIGT FLTSLAVEGN VAASTQNQAQ AGLFFFYQCV LGKQLGFVNA
VRAKQSESIA VWYSREEIEH LLVHLVDVHR LMFLLMYGAG LRHKECRRLR VKDICFDEGH
IVVRDGKGEK DRITFLPERA VDGLKRQIEV AARWHRIDSE EGYPQVYLPY ALARKYPNAC
QELAWKWVFP SRQRARDKRS GKVWRHHIAE QQFANALKIA QRLAKIHKNG VPHSLRHSFA
THLVEAGTDL PTVQKLMGHK DIETTMRYVH VSCELGRSIK SPMDTLKLDT D
//
