ID A0A5J5AZN9_9ASTE Unreviewed; 1973 AA.
AC A0A5J5AZN9;
DT 11-DEC-2019, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2019, sequence version 1.
DT 02-APR-2025, entry version 16.
DE RecName: Full=KOW domain-containing protein {ECO:0000259|SMART:SM00739};
GN ORFNames=F0562_031968 {ECO:0000313|EMBL:KAA8534451.1};
OS Nyssa sinensis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; Cornales; Nyssaceae; Nyssa.
OX NCBI_TaxID=561372 {ECO:0000313|EMBL:KAA8534451.1, ECO:0000313|Proteomes:UP000325577};
RN [1] {ECO:0000313|EMBL:KAA8534451.1, ECO:0000313|Proteomes:UP000325577}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=J267 {ECO:0000313|EMBL:KAA8534451.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAA8534451.1};
RA Yang X., Kang M., Yang Y., Xiong H., Wang M., Zhang Z., Wang Z., Wu H.,
RA Ma T., Liu J., Xi Z.;
RT "A chromosome-level genome assembly of the Chinese tupelo Nyssa sinensis.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM018041; KAA8534451.1; -; Genomic_DNA.
DR OrthoDB; 28901at2759; -.
DR Proteomes; UP000325577; Miscellaneous, Linkage group lg18.
DR GO; GO:0032044; C:DSIF complex; IEA:TreeGrafter.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0003729; F:mRNA binding; IEA:TreeGrafter.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:TreeGrafter.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd06081; KOW_Spt5_1; 1.
DR CDD; cd06084; KOW_Spt5_4; 1.
DR CDD; cd09888; NGN_Euk; 1.
DR FunFam; 2.30.30.30:FF:000053; Protein RNA-directed DNA methylation 3; 1.
DR FunFam; 3.30.70.940:FF:000010; Protein RNA-directed DNA methylation 3; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 3.30.70.940; NusG, N-terminal domain; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041973; KOW_Spt5_1.
DR InterPro; IPR041977; KOW_Spt5_4.
DR InterPro; IPR005100; NGN-domain.
DR InterPro; IPR036735; NGN_dom_sf.
DR InterPro; IPR039385; NGN_Euk.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR005825; Ribosomal_uL24_CS.
DR InterPro; IPR039659; SPT5.
DR PANTHER; PTHR11125:SF8; PROTEIN RNA-DIRECTED DNA METHYLATION 3; 1.
DR PANTHER; PTHR11125; SUPPRESSOR OF TY 5; 1.
DR Pfam; PF23042; KOW1_SPT5; 1.
DR Pfam; PF23291; KOW4_SPT5; 1.
DR Pfam; PF23290; KOW5_SPT5; 1.
DR Pfam; PF23037; KOWx_SPT5; 1.
DR Pfam; PF03439; Spt5-NGN; 1.
DR SMART; SM00739; KOW; 3.
DR PROSITE; PS01108; RIBOSOMAL_L24; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000325577}.
FT DOMAIN 229..256
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 466..493
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 572..599
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 41..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 381..400
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 522..563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 741..1943
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..26
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..60
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 544..563
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..810
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 818..833
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..879
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 883..900
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 959..983
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 984..1039
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1076..1086
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1094..1122
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1160..1178
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1201..1212
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1230..1239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1249..1269
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1359..1370
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1375..1384
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1392..1414
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1422..1436
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1438..1453
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1465..1484
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1485..1497
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1512..1547
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1548..1564
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1594..1604
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1608..1621
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1623..1634
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1650..1660
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1673..1684
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1692..1709
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1739..1749
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1750..1767
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1768..1778
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1779..1796
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1797..1807
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1808..1825
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1826..1836
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1837..1854
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1855..1865
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1866..1883
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1884..1894
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1895..1905
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1973 AA; 207128 MW; 27FE01DD847171BB CRC64;
MASKGKGVAG KDSSGKRKLN DSDKTGSRKR KNPGVLQFFE DAAAEFDENG TSDDSDFDDD
FLEDECDTEV KVKNEPGKAH NLPFLPKEEE LSEEELEKML EERYKPGSSF VTYAEGGYES
KRSVERNSFM PSAKDPTIWK VKCMVGRERH SAFCLMQKYV DLRSLGTKMQ IISAFALEHV
KGFIYIEADK QCDINEACKG LCSIYSTRVA PVPKNEVSHL LSVRSKYNEV SAGSWARVKN
GKYKGDLAQV MAMNGARKKA TVKLIPRIDL QVMAEKFGGG VTAKKTTTPA PRLISSSELE
DFQPLIQYKR DRDTGEICEN LDGMMLKDGY LYKKVSIDSL SCWGVTPSED ELLKFKPSKK
EESDDVEWLS QLYGDRKKKR TVKIDKGGGK GEGSSSSSVP SGFEVHDLVF FGRKDFGVVI
GTEKDDVFKI LKEGSEGPVV ATVELHKLKN ASFDKKLTAA DQHMKTILVN DTVRVLEGPS
KGRQGIVKQI YKGTIFLYDE NELENSGYFC SKSQMCEKVK FSDDGGSGKG GKSGTTDFDD
FVSSPKSPLS PKQTWQASEN NSNVNREDKY GMFSVGQALR IRVGPLKGYL CRVLAVRRSD
VTVKLDSQQK VLTVKCEHLS EVRGKSSTIS MGEDPESVKP FDLLGTQDSS RDWMDGAATS
AADGERWTSG GLSTERSSWP PFSTPGFSLQ PECNSSNPLH SVDNNAEKDV GDAAWESKAA
PNQNSSWGTV VTGEKSVANN EQVGGWGKSE DTGFGSGASD SWGRAKISTG DQAGSSKVGD
IWGNAKLKIG TPDDSSNDAA ASEKSEDPWN KGKKVIANPT NSWNNASAGK NSLDSWGKGK
DGGSSGSTWG KAVESHDKGT GDGIQEDSWG KGKEKRNSKD GSGASSAVWN SSTAAPENQT
GGWGNVGRSS AKPEAEASGW KKATGASGGQ GGNWGNLKKD GEDATGWGKG GSTWGKAVES
QDRDTGEGIQ EDSCRKAAEK WSTKDGSNGR QAVWNCSTVA SDSQTGGWGN TAGSKAQTEA
ESSGWNKTSG ASKGQTENWG NMKKDGGDAP AWNKAGFGKQ DQTDSWNKPK DVGTDGRSSW
NKQDGGSSWK KQDGGSTWNK QDSASSWSKQ NEGSSWSKQA NVNAEDESRG RIDPQNDNWG
KPKSFGGDQG SGGWNKGRMG NKDDTDQQDS WERPKTFDGG RGSGGRRGRG GGRGGRDQFG
RGRSFGQGQS SGWSKQGEEN CGTGDGMATG NLSSWNSGQA GWGNTKPFDG GKNDDGWNKP
NVSEEDKRSS CNKGWDASKE MGGSGDKWNS AKPGWNKGSV TNEESGGSKG HGDGWNTGKA
STGDLRSGWK SGTSGTGGSQ SDWDNKSSDW SNSKVSNKEQ SSVWNKSFTA NEEAGGTGDH
GGGWNKRKAP DVNQSTPWKT TRSNLDGNHS TGWDSKSDWD TQKTYQNRSS GGNQESADSE
RDAEGKNQRD GWNSRKTSGG GSATGWGQSS QWKSGTSDAG GNQDSSWGNK SNWNSGNAFG
GSENQTDTFG NRGRGGNWRG GRGGRVGSDR GFGGRGGPDT GGFGGRGGSD RGGFRGRGGS
DRGGFRGRGR GRRDQSGDWN NRNDSGEDKP YSWNKGSSNN TEAWKSNDGG GSSWNQGGGD
KGQWQSWNSG SNPSKGPVEI GVTNAQAGGW NKGSGSGNGV ASGSLNQSNA ADGGQSSGWN
KGSSSGNGGA SGSWNQSNAA DRGQSSGWNK GSGSGNGDAS GSWNQSNAAD GGQSSGWNKG
SGSGNGGVSG SWNQSNAADG GQSSGWNKGS GSGNGGVSGS WNQSNAADGG QSSGWNKGSG
SGNGGASGSW NQSNAADGGQ SSGWNKGSGS GNGGASGSWN PSNAADGGQS SGWNKGSGSG
NGGAAGSWNQ SNAADGGQSS GWNKGSGSGN GGAAGSWNQS NAAAGQSSGW NQPKDAKGTN
EGGPPTDSCG KVEGSPWGKG HGGVQVVQPV SVLLDSVIGT AEMVAETEGG DNL
//
