ID A0A5J5BH61_9ASTE Unreviewed; 474 AA.
AC A0A5J5BH61;
DT 11-DEC-2019, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2019, sequence version 1.
DT 05-FEB-2025, entry version 18.
DE RecName: Full=HTH TFE/IIEalpha-type domain-containing protein {ECO:0000259|PROSITE:PS51344};
GN ORFNames=F0562_025092 {ECO:0000313|EMBL:KAA8541162.1};
OS Nyssa sinensis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; Cornales; Nyssaceae; Nyssa.
OX NCBI_TaxID=561372 {ECO:0000313|EMBL:KAA8541162.1, ECO:0000313|Proteomes:UP000325577};
RN [1] {ECO:0000313|EMBL:KAA8541162.1, ECO:0000313|Proteomes:UP000325577}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=J267 {ECO:0000313|EMBL:KAA8541162.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAA8541162.1};
RA Yang X., Kang M., Yang Y., Xiong H., Wang M., Zhang Z., Wang Z., Wu H.,
RA Ma T., Liu J., Xi Z.;
RT "A chromosome-level genome assembly of the Chinese tupelo Nyssa sinensis.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the TFIIE alpha subunit family.
CC {ECO:0000256|ARBA:ARBA00008947}.
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DR EMBL; CM018036; KAA8541162.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5J5BH61; -.
DR OrthoDB; 361102at2759; -.
DR Proteomes; UP000325577; Miscellaneous, Linkage group lg13.
DR GO; GO:0005673; C:transcription factor TFIIE complex; IEA:TreeGrafter.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR FunFam; 3.30.40.10:FF:000269; Transcription initiation factor IIE subunit alpha; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039997; TFE.
DR InterPro; IPR017919; TFIIE/TFIIEa_HTH.
DR InterPro; IPR002853; TFIIE_asu.
DR InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13097:SF7; GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1; 1.
DR PANTHER; PTHR13097; TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT; 1.
DR Pfam; PF02002; TFIIE_alpha; 1.
DR SMART; SM00531; TFIIE; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51344; HTH_TFE_IIE; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000325577};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..138
FT /note="HTH TFE/IIEalpha-type"
FT /evidence="ECO:0000259|PROSITE:PS51344"
FT REGION 265..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 337..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 389..474
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 219..246
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 271..283
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 337..349
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 359..373
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 389..400
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 403..418
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..439
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 462..474
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 474 AA; 53425 MW; 5702200BD6CDE155 CRC64;
MSVEPFNRLV KLAARAFYDD ITTKGDNQPK TGRSDNRGIA VVVLDALTRR QWVREEDLAK
DLKLHSKQLR RTLRFFEEEK LVTRDHRKET AKGAKIYSAA VAATVDGLQN GREGDEKIKL
HTHSYCCLDY AQIYDVVRYR LHRMKKKLKD ELDNKNTVQE YICPNCGKRY TALDALRLIS
PDDEYFHCES CNGELVAESD KLAAQEMGDG DDNARRRRRE KLKDMLQKME EQLKPLMEQL
NRVKDLPVPE FGSLQAWELR ANAAGRAGNG DSTANDPSKS SQGLGYGGTP MPFLGETKVE
VAFSGVEEKA DIKSENANSP MKVLPPWMIK QGMNLTKEQR GEVKQELKME GTSSPAELSD
DKKTTGKDDV KNLQDEYVKA YYAALLQRQR EQEEAEKGQQ ERSNTNISNG VNGTSSERQV
GVKSKRDDDE GDDDVEWEEA PPAGNTGESY KVNDLNVQAD ASGDDDDDID WEEG
//
