ID A0A5N5H0U2_9ROSA Unreviewed; 1960 AA.
AC A0A5N5H0U2;
DT 26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2020, sequence version 1.
DT 28-JAN-2026, entry version 15.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=D8674_014859 {ECO:0000313|EMBL:KAB2618990.1};
OS Pyrus ussuriensis x Pyrus communis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus.
OX NCBI_TaxID=2448454 {ECO:0000313|EMBL:KAB2618990.1, ECO:0000313|Proteomes:UP000327157};
RN [1] {ECO:0000313|EMBL:KAB2618990.1, ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S2 {ECO:0000313|EMBL:KAB2618990.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAB2618990.1};
RA Ou C.;
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT "A de novo genome assembly of a pear dwarfing rootstock.";
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAB2618990.1, ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S2 {ECO:0000313|EMBL:KAB2618990.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAB2618990.1};
RA Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT "A de novo genome assembly of a pear dwarfing rootstock.";
RL Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAB2618990.1}.
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DR EMBL; SMOL01000401; KAB2618990.1; -; Genomic_DNA.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP000327157; Chromosome 15.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-ARBA.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 4.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000327157};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT TRANSMEM 1901..1919
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1798..1827
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1853..1879
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1798..1827
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1853..1879
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 185..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 275..302
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 429..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 524..549
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 923..956
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1252..1306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1725..1746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1659..1690
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 32..48
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..66
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..88
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..288
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 439..448
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 923..943
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1253..1267
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1281..1298
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1960 AA; 214699 MW; 2010D1E693D03B7F CRC64;
MDPPQYPHHL TRYAPSSNPY PSDNPPNFPN YPHRHHNTNH NYTHHHHSQQ PPPPQQFLQP
PPPPTPTQTS PYHSLPPPPL PPPPPPPHLT FETERSRTFL PLHDYSVSSP RVAHSERPRH
HRLLQFESPY VESNPVSWDS SRAFHDYDRE LHKPQFRVES EGNGSARFRA DYNEQLLRDH
RVPVDDDYNS RRRARAEPSS DGKYRELGFA SSQNLKSLLD SNSGGYDGRY DELRSGGRRD
EVHENNQRWV RNDREATREL YDPFVFDEGN RGRNVSAKRD YYGSESERGS STSNRRKQIQ
KKSVLLRLQT AKPSHRNGSA YFDNSGSSSH KGKGYYEYSG REMGEVERGA NSLELDVSFK
SNSLVAKAVG NRDAKIDSVY SRDLSNLKLS RDSENAAPVR LRSSIVVANK TSSSDKDPRQ
LEEEVNISGM ENRCDIEQPG SNATGDSSGK SEVERATKGN TKGKVLQRDG KKAGSSQMSS
LKVTKKKKVV KKVVKKVVNP RPQPKKKIDE PQVADSYICS PSTAFGTEKS ETSSPSMVSD
EHGIDANSCS KSTGKTSTCN LGSSSCEEIN IDQGCPTVDA SVQGLLKSSN FTNNVTDSLR
VATCPETGCV VDVSKQICQS GDSLSLDNVI RTESSESRLS VEGNANSGLL SSEKTTTHGD
IMNVNGSGHG AETNLDIDGG IKVSYQEVMV HDIGNVDAIS EQPCTHQLPT SLQIGSVEEL
PKAISSAESS MTVGLSSSGK TFAVCSDDGR GTARNSDKVS NENIIVPNGG NANFVGTQAS
ADGASRSFVS CGTERSSKIA NSAGDRKSVT FKIKKKRKFR TLLDSSRASY TIVEPRNVSA
HENSVDMAVS SSLKDASCAE VAVSGVEKLD TGSQPDNDGV SVLRGNSSLD GICEAKLSAR
SDVNSDPDET SLKYIKRRKV STSHLVGTTS QTNDGPADNS TSYAEAPWTN DDPTQEDEVT
ASSIGFLSAT ANLIPSQEGS TVLFVDDLAA VSAARDALTN DGMNFEHQGV ESCTLYEESV
PDTSFLCPSP LRNEQKEAST QALVVNSHQL DTMDVESNLE ENFGIFSTDE QVMMQGETAL
CSVSSEVQPP DSSNKFSCTD MESNYVSVKE KLPVESNCLL LCANNNAVST TNSNDEGTEF
VHDTVSDKGS PETSTDVLYM QMLPCSPSVI KISDEKAGGV DQQLDLKSVV EGGSNASAKN
SSSGGTKSVM GKSVALPLQN IKKTTHGSNL VSTESGLKNQ LGQATRGIVP GRSYSVSSTS
MKTASSTHIA KPRTWHRNGN SSSSPLPVSM PLSSTVPPQR QLPQRNGKFQ SNSYVRKGNS
LVRKPPVAAP QSSHGFSSAI YQLSSGIDGL KKNAGSDSRI DVKMPPSLMR TGEMNAPFDR
PTPQLPIAPI LSTCPAISFG VHASSPVSEP LSGETKLDPM NSLDTKDAQT FAKDSLTISE
TQENHSGSLN NLENQNVLHD ENSAPPNTKK IVNGKCTLNQ LVATSSPCDL PVHSADKIQH
SSSDGYYKRR KNQLIRTSLE CHAIMPDDNL NLQLQRVPKI VPRRTCGKKR SHKAVAKTSK
TGKNSLVWTP HATQSSNNDG GSLNHQKVVP YLFPWKRARH WRTFMQSQAS SFKYSSAPTI
SKKLLLSRRR DTLYTKSTHG FSLKMYKVLS VGGASLKWSK SLERQSKEAN EEATRAVAAV
EKKKREHNGA PCISLGSKFR NNLSGKRIFR IGSVRYKMDP SRRTLKRISD DESSSSGVLN
PEKDPKRSYV PKRLVIGNDE YLRIGNGNQL IRNPKKRTRI LASERVRWSL HTARLRLAKK
RKYCQFFTRF GKCNKDDGKC PYIHDSSKVA VCTKFLKGLC SNPNCKLTHQ VIPERMPDCS
YYLQGLCSNQ NCPYRHVNVN PKASTCEGFL KGYCADGNEV LSYHIYAFLL VFVFFLCWFE
SGSLGLVLLA STEPNCLVQL CMWCVGMHVD FVGNEFGHTR
//
