ID A0A5N5L6C0_9ROSI Unreviewed; 1016 AA.
AC A0A5N5L6C0;
DT 26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2020, sequence version 1.
DT 08-OCT-2025, entry version 15.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=DKX38_015837 {ECO:0000313|EMBL:KAB5538304.1};
OS Salix brachista.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix.
OX NCBI_TaxID=2182728 {ECO:0000313|EMBL:KAB5538304.1, ECO:0000313|Proteomes:UP000326939};
RN [1] {ECO:0000313|Proteomes:UP000326939}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. br00 {ECO:0000313|Proteomes:UP000326939};
RX PubMed=31307060; DOI=10.1093/gigascience/giz085;
RA Yang J., Wariss H.M., Tao L., Zhang R., Yun Q., Hollingsworth P., Dao Z.,
RA Luo G., Guo H., Ma Y., Sun W.;
RT "De novo genome assembly of the endangered Acer yangbiense, a plant species
RT with extremely small populations endemic to Yunnan Province, China.";
RL Gigascience 8:0-0(2019).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAB5538304.1}.
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DR EMBL; VDCV01000010; KAB5538304.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5N5L6C0; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000326939; Chromosome 10.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16664; RING-Ubox_PUB; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR045210; RING-Ubox_PUB.
DR InterPro; IPR052608; U-box_domain_protein.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45958; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR PANTHER; PTHR45958:SF4; U-BOX DOMAIN-CONTAINING PROTEIN 42-RELATED; 1.
DR Pfam; PF00514; Arm; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 6.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50176; ARM_REPEAT; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000326939};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 226..304
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REPEAT 347..389
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
SQ SEQUENCE 1016 AA; 114001 MW; 3DC25FAA9C14EDC3 CRC64;
MDSVAESLLK SISEIIESVT SIEQEKENFA EIGCYLYRVF PVIMELQTTE HSPKNVMEIL
HSLSKSITEA KYLVSKCQRG TNSNFDSELK STISLLERAI QDMGECLTLI PSSAFQDQEY
AEVAVQALSN EMQSAHFEVG QSQVLQTKEL DPHKSFYEEE PNEEPVMAES DLYPVTLEVS
RDNSLGLITP HFTEFQKPTS LNRQRRKSSS SSSSTSLLKM AEYVEPMYGA FFCPLTKQIM
DDPVTLQSGV TYDRKAITEW LEESENLQEI FCPITGQKLL SRVLRTNVAL KTTIEEWKER
NEVARIKCSR SALVLSASSS MVLEAIRDLH EICKRKQHNK IQVCNAGILP LLFKLLEYRD
RDVIYEVLEL LRELTKDDDD SKMVISEMVD ISAVIKIVST GHQPVRHAAL LLLLEISRSQ
SLLKKIGSVP GGILMLIRFK YNLSVDAFSS EIADEILKNL ERSPENIKLM AENGFLEPLL
KHLTEGAGEM QTEMAEYLGE IALGQDSKTY VVERASPALI KMVRSGNTLT RSAAFKVLAQ
ISSDHPNAKT LAKNGIIQIM VEEMLTRRIN GELINSKSEA VAILANLFEA GLDLENLLVN
SHGSVLAPDY VLYNIIDMIK HSTPDELNIN LIRVLLCLTK SPKSMGTIVS MVKEIEASYT
LVELLTNPHE ELGVVAIKLL IALIPYMGHS IVERLCKTEG QPENLILGQN ETDRITQKQA
VSAKFLAKLP RQSLTLNLAL LSKNTVPAIL QQINQIQRDG MRTSRYATPY LEGLVGILVR
FTTTLYEPQI LFLARKYNFT SIFTEMLMKT SCDEVQRLSA IGLENLSLES INLSKPPEIK
KTKFLKLFYP PKFLSFSSSK KRKQPVCPVH RGACSSQNTF CLVDAKAVER LLACLDHENV
EVVEAALSAI CTLVDDKVDV DKSVGMLCDV NAMQHVLNVV KEHKGEGLWQ KSFWLIDRFL
AKGGNRSASD ISRDRLLPST LVSAFHHGDI DTRQMAEKIL GHLNKMPDFR TSHYTM
//
