ID A0A6A3RQ06_9STRA Unreviewed; 651 AA.
AC A0A6A3RQ06;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 10-JUN-2026, entry version 19.
DE RecName: Full=ATP-dependent RNA helicase Ski2/MTR4 C-terminal domain-containing protein {ECO:0000259|SMART:SM01142};
GN ORFNames=PF005_g18222 {ECO:0000313|EMBL:KAE9193046.1};
OS Phytophthora fragariae.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporomycetes;
OC Peronosporales; Peronosporaceae; Phytophthora.
OX NCBI_TaxID=53985 {ECO:0000313|EMBL:KAE9193046.1, ECO:0000313|Proteomes:UP000433483};
RN [1] {ECO:0000313|EMBL:KAE9193046.1, ECO:0000313|Proteomes:UP000433483}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NOV-27 {ECO:0000313|EMBL:KAE9193046.1,
RC ECO:0000313|Proteomes:UP000433483};
RA Adams T.M., Armitage A.D., Sobczyk M.K., Bates H.J., Dunwell J.M.,
RA Nellist C.F., Harrison R.J.;
RT "Genomic investigation of the strawberry pathogen Phytophthora fragariae
RT indicates pathogenicity is determined by transcriptional variation in three
RT key races.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAE9193046.1}.
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DR EMBL; QXGB01001311; KAE9193046.1; -; Genomic_DNA.
DR OrthoDB; 64767at2759; -.
DR Proteomes; UP000433483; Unassembled WGS sequence.
DR GO; GO:0055087; C:Ski complex; IEA:TreeGrafter.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IEA:TreeGrafter.
DR FunFam; 1.10.3380.30:FF:000011; DEAD/DEAH box RNA helicase; 1.
DR FunFam; 1.10.3380.30:FF:000001; Ski2 ATP-dependent RNA helicase; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR025696; Beta-barrel_MTR4.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR050699; RNA-DNA_Helicase.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF1; ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR SMART; SM01142; DSHCT; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000433483}.
FT DOMAIN 472..650
FT /note="ATP-dependent RNA helicase Ski2/MTR4 C-terminal"
FT /evidence="ECO:0000259|SMART:SM01142"
FT REGION 262..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 651 AA; 72211 MW; 266935599FB6019F CRC64;
MGVNMPARTV VFNGIRKHDG KNFRDLLPGE YTQMAGRAGR RGLDSVGTVI IACWNDVPEP
TSLRTMLAGK ATSLSSQFRL TYNMILNLLR VEVLTVEDMM KRSFSEFHTQ KALASKNIPK
LIQKGKALLQ QLERSLVEDY PHLEASGELA QMQEFYQLKR EKRELEKKMT KWLLTNNIQA
AKNAIAPGRV VILNVKGLSS DQLALVVRTN AAVVGEGGTT RSKLSFETEF QSSTSTGTSH
KGVFKSIMVI TLCPDDYEPP KVELPSASKK SPNSLFGGGR MLRSKKDEDD DRMFGRMGKK
GKSENQESGE LSASSTATLL GRKYAVLEVP ESCVESVTSV TASGVNTKTL VASSSKKELA
SSIEFLTQLE KEAATTQKAA IAYVDLMGEL KVNDLEVATG YTQWQQLYSM VLSHPCATDS
PSVSRVMGKV EKIFKLKTYL VRMTRELSND SLSLFPDFQQ RLSVLKRLGY ISEDGVVQVK
GRVACEINTC EELVLTEMIF ENVLANLEPE EIVAVLSALI FQEKSQSEPT LTPTLESTRE
VVKNIAESLG LIQLEQHLEI DPAVYCKGAL NFGLMEVVYE WARGMPFKQL CELTDVQEGS
IVRCITRLDE VCREVRNAAR VIGDPQLYRK MDVASEAIKR DVVFASSLYL S
//
