ID A0A6G8PVM5_9ACTN Unreviewed; 625 AA.
AC A0A6G8PVM5;
DT 12-AUG-2020, integrated into UniProtKB/TrEMBL.
DT 12-AUG-2020, sequence version 1.
DT 28-JAN-2026, entry version 22.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:QIN78258.1};
GN Name=selB {ECO:0000313|EMBL:QIN78258.1};
GN ORFNames=GBA65_06750 {ECO:0000313|EMBL:QIN78258.1};
OS Rubrobacter marinus.
OC Bacteria; Bacillati; Actinomycetota; Rubrobacteria; Rubrobacterales;
OC Rubrobacteraceae; Rubrobacter.
OX NCBI_TaxID=2653852 {ECO:0000313|EMBL:QIN78258.1, ECO:0000313|Proteomes:UP000502706};
RN [1] {ECO:0000313|EMBL:QIN78258.1, ECO:0000313|Proteomes:UP000502706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCSIO 52915 {ECO:0000313|EMBL:QIN78258.1,
RC ECO:0000313|Proteomes:UP000502706};
RA Chen R.W.;
RT "Rubrobacter sp nov SCSIO 52915 isolated from a deep-sea sediment in the
RT South China Sea.";
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; CP045121; QIN78258.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6G8PVM5; -.
DR KEGG; rmar:GBA65_06750; -.
DR Proteomes; UP000502706; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:TreeGrafter.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:QIN78258.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000502706}.
FT DOMAIN 18..189
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 625 AA; 66316 MW; 552E08ABE910FDFE CRC64;
MTRRRSSTRS GGSVDSRPIS LTIGTAGHVD HGKTTLVRYM TGTDTDRLEE EHRRGISIVP
GYAELTLPSG RRASLVDVPG HERFVKNMVA GSTGVDAFLL VVAADDGVMP QTREHLDVLR
VLGVRRGVVA LTKIDAVDEE TAELAELDAA ELLESVGLEA PILRVSGVTG EGVPELLAAL
DGLAVGEEKR AGALARLPVD RAFVLKGIGL VATGTLWSGE IRTGDTLFTS AGLRPRVRGV
QNHGRPAEVA RAGARTALDL VGVDADALEP GDVLLSNPVA PTRALDARVG LLEGAAPLKH
GTRLRLYHGT RATNARLRLF DGAALQPGEN APARMVLEDE LVVLPGDRFV LRSTSPQITI
GGGTVLDAAP VGRRPEPGWL EALESGDATR VVPLALARSR GSGMTAEELS LVVPSGALNG
GLAAVEDDPE IARLGELYAP AGEIKDARKR LMKALKKRAG ERPESPELSV AEARTATGLD
ARLADALLSE LTGQEIRVSE TGVRLPDADE VPAELEKEAE EVLTALRAAG VEPPAMEATP
ALRLLLKRGS AVRLGEGLFG AREAADEILE EVKEACREGG ELTLAAFRDR LGTTRKFAQA
WLEYADAEDV TRRVGDARVL TRRYR
//
