ID A0A6S6Y002_9PROT Unreviewed; 639 AA.
AC A0A6S6Y002;
DT 02-DEC-2020, integrated into UniProtKB/TrEMBL.
DT 02-DEC-2020, sequence version 1.
DT 28-JAN-2026, entry version 21.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:CAB1370061.1};
GN Name=selB {ECO:0000313|EMBL:CAB1370061.1};
GN ORFNames=DENOEST_2902 {ECO:0000313|EMBL:CAB1370061.1};
OS Denitratisoma oestradiolicum.
OC Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
OC Nitrosomonadales; Sterolibacteriaceae; Denitratisoma.
OX NCBI_TaxID=311182 {ECO:0000313|EMBL:CAB1370061.1, ECO:0000313|Proteomes:UP000515733};
RN [1] {ECO:0000313|EMBL:CAB1370061.1, ECO:0000313|Proteomes:UP000515733}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16959 {ECO:0000313|Proteomes:UP000515733};
RG Genoscope - CEA;
RA William W.;
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; LR778301; CAB1370061.1; -; Genomic_DNA.
DR RefSeq; WP_145770987.1; NZ_LR778301.1.
DR AlphaFoldDB; A0A6S6Y002; -.
DR KEGG; doe:DENOEST_2902; -.
DR OrthoDB; 9803139at2; -.
DR Proteomes; UP000515733; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:TreeGrafter.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09106; WHD_2nd_SelB; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:CAB1370061.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000515733}.
SQ SEQUENCE 639 AA; 69222 MW; 9512EC2980F5EBDC CRC64;
MIVATAGHVD HGKTSLVRQL TGVNTDRLEE EQRRGMTIAL GFAYRKTAAG ASIGFIDVPG
HRRFINTMIA GIRGVDLGML VVDAGEGVMP QTREHVRVME LLGVRDTLAV VTKTDRVSPE
QLRAVSGAVG GLLPGAQVFP VSSLTGEGMV DLQAELAARA ERQQDQEARG YFRLSVDRAF
VLKGAGLIVT GTAMAGRVAV GDSLLLYTVK SGSEGIKVRV RSIHAQDEAA STGQSGQRCA
LNLVGDVERE DIQRGDMLAD ARCVAPGLRF DARLRLLDDL PFSLKHLQPV KLYLGARRLA
ARVYFLETDG PSSPAGMGLV QFVLQEPLQV CWGDRFLIQD DSESVILGGG RVLGPAAPQW
HKRKPARLAW LAALDHDDPA AILGAWLEVG MGPVDLAAVQ TALNLRDDEL AALLSLPTLA
GLLRLRGDHG DWLLNAGDWN AQREQLFAQV ADWHKEHPMD AGMPQALLLR GNPGPAFLAA
VLEALVQEKR LLLAGGRVSC AGYRATLPTA IQAGWERLQA YTVERGFHLP LLSEIERDLG
LGTKVQGAVI ATALKSGQLV QVSSKRLTLP SVLQGLAVEI QHLAARQEIF SVIETKVHLG
LGRDLTIEIL EYFDSVKFTR REGNGRRLRD ADWPRRMAA
//