ID A0A7J6UWP7_THATH Unreviewed; 506 AA.
AC A0A7J6UWP7;
DT 07-APR-2021, integrated into UniProtKB/TrEMBL.
DT 07-APR-2021, sequence version 1.
DT 05-FEB-2025, entry version 11.
DE SubName: Full=Rna polymerase sigma factor siga {ECO:0000313|EMBL:KAF5177044.1};
GN ORFNames=FRX31_033367 {ECO:0000313|EMBL:KAF5177044.1};
OS Thalictrum thalictroides (Rue-anemone) (Anemone thalictroides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Ranunculaceae; Thalictroideae;
OC Thalictrum.
OX NCBI_TaxID=46969 {ECO:0000313|EMBL:KAF5177044.1, ECO:0000313|Proteomes:UP000554482};
RN [1] {ECO:0000313|EMBL:KAF5177044.1, ECO:0000313|Proteomes:UP000554482}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. WT478/WT964 {ECO:0000313|Proteomes:UP000554482};
RC TISSUE=Leaves {ECO:0000313|EMBL:KAF5177044.1};
RA Arias T., Riano-Pachon D.M., Di Stilio V.S.;
RT "Transcriptomic and genomic resources for Thalictrum thalictroides and T.
RT hernandezii: Facilitating candidate gene discovery in an emerging model
RT plant lineage.";
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC {ECO:0000256|ARBA:ARBA00007788}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAF5177044.1}.
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DR EMBL; JABWDY010041896; KAF5177044.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A7J6UWP7; -.
DR OrthoDB; 2012130at2759; -.
DR Proteomes; UP000554482; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR050239; Sigma-70_RNA_pol_init_factors.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF14; RNA POLYMERASE SIGMA FACTOR SIGA; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000554482};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 290..303
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
SQ SEQUENCE 506 AA; 56995 MW; EED72AF62AE32CD8 CRC64;
MATAAVIGVS AGKHLLSSSL YYSDITDKLH SVYHDHGLIQ YQTVLPIISA KKSTHFGPSF
PHDQHTKAIQ EHVNALAAAA SVTAETVSLH KLDSVERGSF DFESSTLEAL LLLQKSMLEK
QWNLSFERKG VLIEPIEQRC KKVGVINSGI SARQRRSMRK YVACNSNVVS PSRNKNIGST
VSPDLLGDRS KSYVKGVLSV ELLTHAEVVH LSKKIKAGLS LEDYKSRLKK RLGYTPSDEQ
LATSLKISRA ELRSKLIECS LARERLAMSN VRLVISIAQK YENMGAEMAD LVQGGLIGLV
RGIEKFDSSK GFKISTYVYW WIRQGVSRAL IENSRTLRLP THLHERLSLI RNAKIRLEDE
GITPSIERIA ESLNMSQKKV RNATEQAISK VFSLDREAFP SLNGLPGETL HSYIADTRLE
NNPWHGIDEW TLKVEVNNLI KTTLREREQD IVRLYYGLDK ECLTWEDISK RIGLSRERVR
QVGLVALEKL KHAARRKKLE AMLVKH
//
