ID A0A7J8V9K4_9ROSI Unreviewed; 2118 AA.
AC A0A7J8V9K4;
DT 07-APR-2021, integrated into UniProtKB/TrEMBL.
DT 07-APR-2021, sequence version 1.
DT 08-OCT-2025, entry version 12.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
DE Flags: Fragment;
GN ORFNames=Goklo_011615 {ECO:0000313|EMBL:MBA0659478.1};
OS Gossypium klotzschianum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=34286 {ECO:0000313|EMBL:MBA0659478.1, ECO:0000313|Proteomes:UP000593573};
RN [1] {ECO:0000313|EMBL:MBA0659478.1, ECO:0000313|Proteomes:UP000593573}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=57 {ECO:0000313|EMBL:MBA0659478.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0659478.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the evolution of the New World diploid cottons (Gossypium,
RT subgenus Houzingenia) based on genome sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBA0659478.1}.
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DR EMBL; JABFAB010000009; MBA0659478.1; -; Genomic_DNA.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP000593573; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000593573};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1840..1868
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1967..1995
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1840..1868
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1967..1995
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 222..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 353..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 565..648
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 922..957
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1273..1336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1348..1372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1427..1481
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1768..1789
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..26
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..61
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 296..306
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 353..377
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 386..396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..425
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 435..444
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 621..645
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 925..934
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1290..1306
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1317..1336
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1441..1455
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1458..1468
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1471..1481
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1772..1788
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:MBA0659478.1"
SQ SEQUENCE 2118 AA; 231269 MW; 09F8887FF60734B8 CRC64;
HLPPQIRPPP PPPPLPQQNQ QQTYQPLPAP PPPLPRQQYS NHPPYNPHHP QYSSSSNFNS
NPKPTHVSHQ FHDVPQRRLP EFDTRPDYWP ENRVPRPHPV SNLDREALYH QFXXXXSPVI
DRFMHDLEGT SRFRDLELNQ REREGRVHND RWISDRSSRD FGIVSIGFES NSNNSRFDHE
ATENIRWGSR LREPLIESGN DEINERDEMR VFSRKNDYCD PEAERFSDKG SGREGNHEFN
RTPRKQIQKK SALLRIQKVK PSHRSREDER PHYLGYHNEG KTGTFRGKDS VLQSDHGMDE
KKREGTPVEL DVSFKSNSLV AKAIVTSSPA SNFDSNLMPR NTKIRKLTTF DMVSSSAQPN
KGSESTAKLG GSTSAVKSGS GPVDSKQSEG KIKSSDTGKA QDGIRKPCSK GTKVFLRKGK
VKKSPKVTVT DDAPSSDKKL RPLEGKGTTP CIGSKGDGGV ETSSNSVNIS VRENKVGGTV
KSTVSDKTTA TVGKSSSLKA NKKKIIVRKV VKKVVSSPLN MGNSELAKKG DQLVKTDISI
RRASATPVAE KRVLPLKMKI ASASGDSVQG VDSECSPEES ALILEDDKVN EALKGTGSKK
VSTDVDPGSS VSPKITRKRS SSTVALNSSS QGESNVDQGS TNAGNSVPGL HIISNIKEDH
TEKPNETITS GSFGVEDLNT RFYHNENNIN YGLSRSEDIK AHGGIVAIGS SSVAMPISTG
FDCGSSSSLE KNIVCDIGDA NSGSRHVCTT PSSPVVDDRA NGGLPEANCS VGSDKMPLLP
CMEETYVSGG SVYGDCSNHD KSTTSTPDIV YVNTGERNHE IGHDLVLSLG FSGTGIPNAV
ESVECRDKYA ANIHKRKVGI SELDLSSSAL ASISVGSADV LTSANCVDST ICASEIDLNP
AEPMVGAIGL LDVGLEHSRD KDSILQGSSS NNTFPEIGGS ADGKSPEKKK RKISTSSSSL
TSPVISQSVV VSDIFKSAAQ IPSNFTDDLL QLEPEVKVSS TDDLHAEGID LLHVNSSVAG
PSEDVGSFSD ACRGNPPKID PSAFAESVAP SSPCLHPLEL GGEQFSNGTP VSAISNHQSD
AMDIEGDDRG KVLVDTSEEQ NIISSEVTQC RIIPEHVSFG LDKRLTGIDA DDDNHLPLKD
DLPSTSNSLI SGVDANEVSA TNSNDEAMPA PDILCDVGSL SNLVLSTSTC KGHLFNSEEK
TYDNEKLSYD KPVIEGSCNS SAHVSDPQHS KTILKSNDVI QTNQSSAVKA GLLPSYDSES
TISLNFLSGE TQGRKPLLSH VGPKSYPTRS SFVSSASKNA TSSTKITKPR TWRRTDNSSA
HPLSGNKPSL SANPMQRQMP TYIRKGNSLV RKPTPVPAPP QGSHSSSSSV YRLKSGIVDE
VKKGTGPNNR ADAVDLRTAA ANTTFERPTT PPLLSVAKVP KHISNSSGEC TYSPLAEPSA
SDFNETTTNH PSSMEINDEL KSPEDGPKTL ETLNRNGSAN NLEVLNEQNE SGLIPSNEKR
VTYVKPKSNQ LVATSDSDHT SIVDVDKNQS LSASSDGYYK KRKNQLIRTA LESHMKQAVT
SSDDISNSVR EIAAKVISSR NFGKRRSNKV VAKTHKPSKF SLVWTPHSAR LSNNDGSSLC
YPKVRPQLFP WKRMAHKRSF KLNSVSSYSS SLSTIGRKML LLRKRNTVYT RSINGFSIHK
SKVLSVGGSS LKWSKSIERH SRKANEEATL AVAEAERKKR EQGTVSRTGK KGLSCHKVHG
TEVRRGERIF RIGSVRYKMD SSRRSLQRIS DDASTCSASQ QSENSTKKSY VPRRLVIGND
EYVRIGNGNQ LVRDPKKRTR VLASEKVRWS LHTARLRLVK KRKYCQFFTR FGKCNKDDGK
CPYIHDPSKI SVCTKFLKGL CSNPNCKLTH KVIPERMPDC SYFLQGVSFL NYAFLFLILD
MQILTELLAG LCTNENCPYR HVHVNPNAST CEGFLRGYCA DGNECRKKHS YVCPNFEATG
SCPLGSTCKL HHPKNRSKAK KSKRSMEHNT ARGRYFGIDI SEPKRMVSER QQEVLEEDNI
CFDGKFSDYI SLGVSEDEVG GLHQANCDET SFGDNDSTDL QSEDLDELIK PIRIMSECKI
TESFLVTESS SGKHLAIQ
//
