ID A0A7J9E1B1_9ROSI Unreviewed; 1316 AA.
AC A0A7J9E1B1;
DT 07-APR-2021, integrated into UniProtKB/TrEMBL.
DT 07-APR-2021, sequence version 1.
DT 18-JUN-2025, entry version 16.
DE RecName: Full=Histone deacetylase interacting domain-containing protein {ECO:0000259|SMART:SM00761};
GN ORFNames=Gotri_015803 {ECO:0000313|EMBL:MBA0766799.1};
OS Gossypium trilobum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=34281 {ECO:0000313|EMBL:MBA0766799.1, ECO:0000313|Proteomes:UP000593568};
RN [1] {ECO:0000313|EMBL:MBA0766799.1, ECO:0000313|Proteomes:UP000593568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0766799.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0766799.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the evolution of the New World diploid cottons (Gossypium,
RT subgenus Houzingenia) based on genome sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00810}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBA0766799.1}.
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DR EMBL; JABEZW010000006; MBA0766799.1; -; Genomic_DNA.
DR Proteomes; UP000593568; Chromosome 6.
DR GO; GO:0000785; C:chromatin; IEA:TreeGrafter.
DR GO; GO:0000118; C:histone deacetylase complex; IEA:TreeGrafter.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:TreeGrafter.
DR FunFam; 1.20.1160.11:FF:000001; Paired amphipathic helix protein Sin3; 1.
DR FunFam; 1.20.1160.11:FF:000002; Paired amphipathic helix protein SIN3; 1.
DR FunFam; 1.20.1160.11:FF:000003; Paired amphipathic helix SIN3-like protein; 1.
DR Gene3D; 1.20.1160.11; Paired amphipathic helix; 3.
DR InterPro; IPR013194; HDAC_interact_dom.
DR InterPro; IPR003822; PAH.
DR InterPro; IPR036600; PAH_sf.
DR InterPro; IPR039774; Sin3-like.
DR InterPro; IPR031693; Sin3_C.
DR PANTHER; PTHR12346:SF8; PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2; 1.
DR PANTHER; PTHR12346; SIN3B-RELATED; 1.
DR Pfam; PF02671; PAH; 3.
DR Pfam; PF08295; Sin3_corepress; 1.
DR Pfam; PF16879; Sin3a_C; 1.
DR SMART; SM00761; HDAC_interact; 1.
DR SUPFAM; SSF47762; PAH2 domain; 3.
DR PROSITE; PS51477; PAH; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00810}; Reference proteome {ECO:0000313|Proteomes:UP000593568};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 421..521
FT /note="Histone deacetylase interacting"
FT /evidence="ECO:0000259|SMART:SM00761"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 183..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 694..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 812..845
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 864..1009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..25
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 185..213
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..279
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 713..726
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 749..769
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 770..788
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 812..821
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 867..876
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 877..890
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 922..939
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 944..963
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 976..987
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1316 AA; 148297 MW; 664B5B352B7DB131 CRC64;
MPGGGGGGGT GGGEGGGGGA GGGGSMSQKL TTNDALTYLK EVKEMFQDQK EKYDMFLEVM
KDFKAQRTDT AGVIARVKEL FKGHNNLIYG FNTFLPKGYG ITLDEDEAPP KKTVEFDEAI
SFVNKIKKRF LNDEHVYKSF LDILNMYRKE HKDINEVYTE VASLFEDHPD LLDEFTRFLP
DSQAAPMTQQ VPYGRNSTQH YNERSSATPT LRQIQMDKQR RRDRNITSNA DRDLSVDRPE
LDDDKAVIKM QKEQRKRVEK DSRDQRIRDH DDPEHDNNRD FNLQRFPDKK RSGRKVEGFA
SYDDRDTFKS MCNQGFVFCE KVKERLCNSD DYQAFLKCLN IYSNGIIKRN DLQNLVTDLL
GKYPDLMNEF NQFLERCENT ESLTVVGHAP KSEEKREIEA AKEKERYKYM GKSIQELDLS
NCQSCTPSYR LLPDDYPIPI ASQRSELGAQ VLNDNWVSVT SGSEDYSFKH MRRNQYEESL
FRCEDDRFEL DMLLESVSST AKRAEDLLNS INENKINLDS PFHVEEHFTV LNLRCIERLY
GDHGLDVMEI LRKNPALALP VILTRLKQKQ EEWTKCRLDF NKVWAEIYSK NHYKSLDHRS
FYFKQQDSKN LSVKSLVAEI KELKEKNQKE DDVLMASVAG HRQPPAPHLE YEYVDVNIHE
DLYKLIEYSC EEMCSTKEQL NRVMRLWTTF LEPMLGVPPQ RNGRKGTEGA GKAQNSAVNG
TASSIAESDG SPGADATVNS GQPKAASNGD GNSSSELTNS CRNGLTNRET LAKDEHSGRV
SRVDSKPEKE IKFTADKRPG INMVAIGIKA ENNQGRSNVE GTSGPGAAAS RPTSIAAGEA
HESEANVDLV HSSEGVTVAK HALIVNGTPT DGSNASRYHE ESTGPSKVEK EEGELSPNGD
FEEDNFVAYG DAGPKVVPKA KHGVESRQQR SGNGKDLHSV DAGGENDADA DDEDSENASE
AGDDASGSES AGDECSHEEE EEVERDEVDG KAESEGEAEG IADAHVGGDG TSLSFSERFL
FTVKPLSKHV PPDLLEDEKY NSWVFYANDD FYVLFRLHQI LYERILSART NLAGGEIKWK
HLKDTSSSDL YARFMSALYS LLNGSTDNTK FEDECRAIIG NQSYVLFTLD KLIYKLVKQL
QAVAADEMDN KLLQLYEYEK SRKHWKTMDS VYYENARVLL HEENIYRLKC SSSPSRLSIQ
LMDNVIEKPE AFAVSMEPNF SAILHNDFLS VFPGKKEPHG IILKRNKKNY ANLDEFDATC
MAMEGVELVN GLENKIACNS YKNPLVQTKP QKAFENDMFC VCSNMVDAQT EERTNC
//
