ID A0A7K4N0D8_9ARCH Unreviewed; 185 AA.
AC A0A7K4N0D8;
DT 07-APR-2021, integrated into UniProtKB/TrEMBL.
DT 07-APR-2021, sequence version 1.
DT 18-JUN-2025, entry version 18.
DE RecName: Full=Large ribosomal subunit protein uL6 {ECO:0000256|HAMAP-Rule:MF_01365};
GN Name=rpl6 {ECO:0000256|HAMAP-Rule:MF_01365};
GN ORFNames=HX834_02905 {ECO:0000313|EMBL:NWJ68286.1};
OS Marine Group I thaumarchaeote.
OC Archaea; Nitrososphaerota; Marine Group I.
OX NCBI_TaxID=2511932 {ECO:0000313|EMBL:NWJ68286.1, ECO:0000313|Proteomes:UP000554454};
RN [1] {ECO:0000313|EMBL:NWJ68286.1, ECO:0000313|Proteomes:UP000554454}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D17 {ECO:0000313|EMBL:NWJ68286.1,
RC ECO:0000313|Proteomes:UP000554454};
RX PubMed=30592124;
RA Wang Y., Huang J.M., Cui G.J., Nunoura T., Takaki Y., Li W.L., Li J.,
RA Gao Z.M., Takai K., Zhang A.Q., Stepanauskas R.;
RT "Genomics insights into ecotype formation of ammonia-oxidizing archaea in
RT the deep ocean.";
RL Environ. Microbiol. 21:716-729(2019).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000256|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000256|HAMAP-Rule:MF_01365}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:NWJ68286.1}.
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DR EMBL; JACATA010000007; NWJ68286.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A7K4N0D8; -.
DR Proteomes; UP000554454; Unassembled WGS sequence.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IEA:UniProtKB-UniRule.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:UniProtKB-UniRule.
DR GO; GO:0002181; P:cytoplasmic translation; IEA:TreeGrafter.
DR FunFam; 3.90.930.12:FF:000008; 50S ribosomal protein L6; 1.
DR Gene3D; 3.90.930.12; Ribosomal protein L6, alpha-beta domain; 2.
DR HAMAP; MF_01365_A; Ribosomal_uL6_A; 1.
DR InterPro; IPR000702; Ribosomal_uL6-like.
DR InterPro; IPR036789; Ribosomal_uL6-like_a/b-dom_sf.
DR InterPro; IPR020040; Ribosomal_uL6_a/b-dom.
DR InterPro; IPR019907; Ribosomal_uL6_arc.
DR NCBIfam; NF004037; PRK05518.1; 1.
DR NCBIfam; TIGR03653; uL6_arch; 1.
DR PANTHER; PTHR11655:SF16; 60S RIBOSOMAL PROTEIN L9; 1.
DR PANTHER; PTHR11655; 60S/50S RIBOSOMAL PROTEIN L6/L9; 1.
DR Pfam; PF00347; Ribosomal_L6; 1.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR SUPFAM; SSF56053; Ribosomal protein L6; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000554454};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01365};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01365};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01365};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01365}.
FT DOMAIN 99..173
FT /note="Large ribosomal subunit protein uL6 alpha-beta"
FT /evidence="ECO:0000259|Pfam:PF00347"
SQ SEQUENCE 185 AA; 20717 MW; 5A4AADA7CC8B4A51 CRC64;
MSTKQIEKST TEIQIPKDVK VNLKGSMLQV QGPLGKVYKN FKKIPVLIQI NDNKILLRKT
GERKKHQAIL NTAKSLIQTL CTGVVDGFTI KMKIVYSHFP VTVKVEAKKV LIKNFQGERA
PRISMIKGDT KVVVKGDDVI ITGPVLTDVS QTAANIQLKS KVKNKDHRVF LDGIYRYSKS
KGIEE
//
