ID   A0A7M5UJ04_9CNID        Unreviewed;       995 AA.
AC   A0A7M5UJ04;
DT   07-APR-2021, integrated into UniProtKB/TrEMBL.
DT   07-APR-2021, sequence version 1.
DT   08-OCT-2025, entry version 14.
DE   RecName: Full=RNA-polymerase II-associated protein 3-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF13877};
OS   Clytia hemisphaerica.
OC   Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Leptothecata;
OC   Obeliida; Clytiidae; Clytia.
OX   NCBI_TaxID=252671 {ECO:0000313|EnsemblMetazoa:CLYHEMP010738.2, ECO:0000313|Proteomes:UP000594262};
RN   [1] {ECO:0000313|EnsemblMetazoa:CLYHEMP010738.2}
RP   IDENTIFICATION.
RG   EnsemblMetazoa;
RL   Submitted (JAN-2021) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR   AlphaFoldDB; A0A7M5UJ04; -.
DR   EnsemblMetazoa; CLYHEMT010738.2; CLYHEMP010738.2; CLYHEMG010738.
DR   OrthoDB; 2942533at2759; -.
DR   Proteomes; UP000594262; Unplaced.
DR   GO; GO:0005829; C:cytosol; IEA:TreeGrafter.
DR   GO; GO:0005739; C:mitochondrion; IEA:TreeGrafter.
DR   GO; GO:0031072; F:heat shock protein binding; IEA:TreeGrafter.
DR   GO; GO:0006626; P:protein targeting to mitochondrion; IEA:TreeGrafter.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR051982; CiliaryAsmbly_MitoImport.
DR   InterPro; IPR025986; RPAP3-like_C.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_rpt.
DR   PANTHER; PTHR45984; RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG; 1.
DR   PANTHER; PTHR45984:SF1; SPAG1 AXONEMAL DYNEIN ASSEMBLY FACTOR; 1.
DR   Pfam; PF13877; RPAP3_C; 1.
DR   Pfam; PF13432; TPR_16; 1.
DR   Pfam; PF13181; TPR_8; 1.
DR   SMART; SM00028; TPR; 9.
DR   SUPFAM; SSF48452; TPR-like; 3.
DR   PROSITE; PS50005; TPR; 2.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000594262};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW   ProRule:PRU00339}.
FT   REPEAT          203..236
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          270..303
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   DOMAIN          866..956
FT                   /note="RNA-polymerase II-associated protein 3-like C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF13877"
FT   REGION          62..185
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          322..358
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          373..431
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          585..669
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          797..861
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        76..87
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        120..154
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        346..355
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        397..422
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        590..599
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        622..631
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        635..669
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        800..810
FT                   /note="Low complexity"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        823..840
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        848..861
FT                   /note="Low complexity"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   995 AA;  112178 MW;  575D6702AADC13CA CRC64;
     MFGVCKIDQS IPIEHLDYKF IGSCKDVELL QKLVKILRSG EEGIYPDLTH FAEEQLRKFS
     PKNPLLEKVN PEKSTSELGN EEQQNIVNDL KGFTKDTKTL QNGNKDNLPP VRNSKTLNVD
     ADKENKPEVN KKSDNKRVTP RSYDEWSKLD KEIENSTNED DIASSKGAKA KMNDTGKGSL
     KPDEMIGKLN TKDLTIEELA EQAEKEKNKG NEAFRSGDYK EALVYYNRSI ELSPAPAVHN
     NRAMAYIKLE EYEKAIIDCN CVLKDESNNI KAFLRRGLAY QALKKLDLAL KDFTMVVEIE
     PKNKRGKELY ESVYKDLEKQ KDSGAKKKGG GKRLVVEEID STQDEGDSKT TEPMKKSPGN
     RIVIEEVDSV SAPVQEVSQG PIKPAEEAPE TVEVKEQQQI QEPTLESTAS TGGIETQDNI
     MNPPSSEAPP PPVVYKELPQ DALKWKNEGN DLYKNGQYQE AYQKYTFAIQ ILMDDVTGYK
     TALSSLFNNR AICQLKSGNC SECIKDCTKS LKYLANIKAI QRRATAYETL EKYKDAYADF
     QIVYSRTRDP KVSQAMSRIS NHLKSDYGRD WHDKLPARDA LDWNDAPASA ITSPPVKSSV
     QEEENTKQAS TVEDQSPALV KQANNNIASQ TKPAVAKEEK KPEIKPVEVK HKVIDQKPGE
     KPQPKQEKTI QEQFVETKEK GNSFVKQAKY SEAIPFYTQC ISLLPSEVPS YTNRALCYLK
     VKEAKPLKAV EDCTQALKLQ PGNIKALFRR AQGYRMLKKY KEALGDLASI LKEEPKNKAA
     QKDMDECKDL YRTELREMQS KAQQSSSSTK KSGKKMKIEE VTSDTLASNK PPTKQSTKNK
     TCPLAKGSTT PSSTSKSSTT NSNKKINAVE FMQMWNGIKS GKSSEYAEIL RQIEPTKLPE
     LLSNKLDGKI LENFVWAISD HFTSKENYKY GMTLLKSMHR VQRFSTMLMF LGTQEKTLLK
     SSMDTLESRA KQDGCEKTVF NEISQLRSQY RCSPL
//