ID A0A835I5U1_9MAGN Unreviewed; 429 AA.
AC A0A835I5U1;
DT 29-SEP-2021, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 1.
DT 02-APR-2025, entry version 13.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAF9610667.1};
GN ORFNames=IFM89_023923 {ECO:0000313|EMBL:KAF9610667.1};
OS Coptis chinensis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Ranunculaceae; Coptidoideae;
OC Coptis.
OX NCBI_TaxID=261450 {ECO:0000313|EMBL:KAF9610667.1, ECO:0000313|Proteomes:UP000631114};
RN [1] {ECO:0000313|EMBL:KAF9610667.1, ECO:0000313|Proteomes:UP000631114}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HL-2020 {ECO:0000313|EMBL:KAF9610667.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF9610667.1};
RA Wang B., Shu S., Song C., Liu Y.;
RT "The Coptis chinensis genome and diversification of protoberbering-type
RT alkaloids.";
RL Submitted (OCT-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAF9610667.1}.
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DR EMBL; JADFTS010000004; KAF9610667.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A835I5U1; -.
DR OrthoDB; 266020at2759; -.
DR Proteomes; UP000631114; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_CS.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR053234; RPM1_Interactor.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR33443:SF30; SARCOSINE DEHYDROGENASE-2C PROTEIN; 1.
DR PANTHER; PTHR33443; ZGC:112980; 1.
DR Pfam; PF00313; CSD; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000631114};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 319..385
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 414..429
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
SQ SEQUENCE 429 AA; 47988 MW; DC2C119CB5B10644 CRC64;
MEEALRMTRA KNTRVKLAGF TRLYKILEPS RNTTISSTEA TSLVECCVHF LNKNKTNDYR
YALKALSLLS NDHFELHLNT IFPALVTRLL NDRSLVEQLF NKNKKVCAKV EKEDKGVENE
DGEDDCVILD DDECVILDGD PYKEIKILNV GIGNDDDDDD DDELVIVAEK GQVACRDYPH
PRHLCARFPF NTNAHEKHCD LCHCYVCDTR APCVYWGTGG SGGYHCHSTD KEKTWREQRE
CFKQGKMAQI PASKHHETTP SVAPTTHPTL THSEPLNSGN VSTHTNSCSN TPHAFSNEGR
DVLSLRSMVL DRPRVPGERL TGTVKWFNSF RGYGFITPSS GGEDVFVHYS SIKSKVFKSL
SSDEDVEFQI GTGYDGRDRA VDVSVLGRDD GGGYTNSGFC NQGTTRRFNR SGCCYQCGGE
GHFARECPN
//
