ID A0A840RZL2_9BURK Unreviewed; 730 AA.
AC A0A840RZL2;
DT 29-SEP-2021, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 1.
DT 28-JAN-2026, entry version 16.
DE SubName: Full=Selenocysteine-specific elongation factor {ECO:0000313|EMBL:MBB5201931.1};
GN ORFNames=HNR39_003793 {ECO:0000313|EMBL:MBB5201931.1};
OS Glaciimonas immobilis.
OC Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
OC Burkholderiales; Oxalobacteraceae; Glaciimonas.
OX NCBI_TaxID=728004 {ECO:0000313|EMBL:MBB5201931.1, ECO:0000313|Proteomes:UP000571084};
RN [1] {ECO:0000313|EMBL:MBB5201931.1, ECO:0000313|Proteomes:UP000571084}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23240 {ECO:0000313|EMBL:MBB5201931.1,
RC ECO:0000313|Proteomes:UP000571084};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (AUG-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBB5201931.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JACHHQ010000009; MBB5201931.1; -; Genomic_DNA.
DR RefSeq; WP_168054562.1; NZ_JAAOZT010000005.1.
DR AlphaFoldDB; A0A840RZL2; -.
DR Proteomes; UP000571084; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd03696; SelB_II; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR048931; WHD_2nd_SelB_bact.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF09106; WHD_2nd_SelB; 1.
DR Pfam; PF21214; WHD_2nd_SelB_bact; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 3.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:MBB5201931.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000313|EMBL:MBB5201931.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000571084}.
FT DOMAIN 1..172
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
FT REGION 177..211
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 648..667
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..209
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 648..657
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 730 AA; 78325 MW; 272CBCC9685BC26E CRC64;
MIVGTAGHID HGKTTLTRAL TGVDTDRLKE EKERGISIEL GYAYLPLPNG EILGLIDVPG
HEKLIHTMAA GASGIDFALL VIAADDGIMP QTREHLAILE LLGITRAAVA LTKIDRVDSD
RIVVVENDIN ALLAPTVFVG VPIFRTRAHI PGDVGVAALL AYLTHFAGCT NNGKSDDNGN
NGNNGNNGNN GNNGNNGNNG NNGNDCNSDN HGDSAITSAT VADATLTKRI QPETHLFRLA
IDRVFTLAGH GTIVAGTALA GRVCVDDTLM LVPGGERVRV RSIHAQNRPA TSGHAGQRLA
LNLVGIAREQ INRGDWILSP ALAECSERID VDLRLLGDAG LILKSWSPVH VHLGATHRTA
HVVLLEGELL KPGQRTRVQL VFNEPVHAVP GDRFVIRNAQ ASRTIGGGQV LNPFGPAYKR
RSAASDVWRD ALAAFILSGD SAALLDCSPL GLSRSTLVRL SQVSQERLGL PNETHIIPLR
DGDALLMSDV AWGSLAGRTI DALRDFHASA PDDIGPQTGR LRRIVEPALD EPLWRALLTF
LCDSALIIRQ GPWVHLSEHT VELGADEQAL AARMLGAIHA AGFNPPWVRD LARLCDVSET
VVRDLLCKCA KRGQASQVVP DLFYHPSRIE ELSRMIAKLA EGTDDVVARQ ENSKNDTGEL
GTGNEDGANG RIVSLATTRH PVSAAAFRDA SSLGRKRAIQ LLEFFDRVGY TRRFKDAHIL
RSAGLWASDS
//
