ID A0A8T0NN97_PANVG Unreviewed; 487 AA.
AC A0A8T0NN97;
DT 12-OCT-2022, integrated into UniProtKB/TrEMBL.
DT 12-OCT-2022, sequence version 1.
DT 28-JAN-2026, entry version 11.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=PVAP13_9KG323800 {ECO:0000313|EMBL:KAG2550713.1};
OS Panicum virgatum (Blackwell switchgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum;
OC Panicum sect. Hiantes.
OX NCBI_TaxID=38727 {ECO:0000313|EMBL:KAG2550713.1, ECO:0000313|Proteomes:UP000823388};
RN [1] {ECO:0000313|EMBL:KAG2550713.1, ECO:0000313|Proteomes:UP000823388}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AP13 {ECO:0000313|Proteomes:UP000823388};
RA Lovell J.T., Jenkins J., Shu S., Juenger T.E., Schmutz J.;
RT "WGS assembly of Panicum virgatum.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAG2550713.1}.
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DR EMBL; CM029053; KAG2550713.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A8T0NN97; -.
DR Proteomes; UP000823388; Chromosome 9K.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0016567; P:protein ubiquitination; IEA:InterPro.
DR CDD; cd16655; RING-Ubox_WDSUB1-like; 1.
DR CDD; cd01989; USP_STK_Ubox_N; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR051348; U-box_ubiquitin_ligases.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45647; OS02G0152300 PROTEIN; 1.
DR PANTHER; PTHR45647:SF3; OS10G0552400 PROTEIN; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000823388};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786}.
FT DOMAIN 409..483
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT COILED 247..322
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 487 AA; 54523 MW; F1DF0206F8717B40 CRC64;
MSQSTAQGPD LQVAWELPPC ICLLNRGFTA NSAKRMAAAP EKVFVALPAE FKVGRSSLSW
VLSHFGGSGA TIVITHVHVP PQMIPVMGVK FHSSKLSPEQ VKLFRRIERE KVNKQLDSYV
HQCSRMKVKC EKLVFEKEDV VAGLVELIVL HRVTRLVISA AADRQYSSFG LRKMDKPKST
KATEIMQRAD PACKIWFICK GRLVCTRGKE VDTSPSATPL LPDFDHQTLQ LVPYQKENNI
QSELGLYDEL KEACIAAENL MKRALNESSR RQKADEEVVL AIQKANEYQE LYLEEARKRQ
ELEEALARAN REIAQLRQAN HLPVDEQNTS PDDLQEAISE ESTFERHIVD MDAILATAGQ
VTEPQKEHVH IQIDLDTGGK ELQALLSQCK PTAFSSPSSV IQSPYDEDCI PSYFLCPILQ
EPMRDPHVAA DGSTYEADAI RGWLDGGSDA SPVTGQPLAH RELAPNFALG AVIQDYTMRR
RQQHRFS
//
