ID A0A8T0TSN1_PANVG Unreviewed; 1616 AA.
AC A0A8T0TSN1;
DT 12-OCT-2022, integrated into UniProtKB/TrEMBL.
DT 12-OCT-2022, sequence version 1.
DT 28-JAN-2026, entry version 7.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=PVAP13_4KG333900 {ECO:0000313|EMBL:KAG2613077.1};
OS Panicum virgatum (Blackwell switchgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum;
OC Panicum sect. Hiantes.
OX NCBI_TaxID=38727 {ECO:0000313|EMBL:KAG2613077.1, ECO:0000313|Proteomes:UP000823388};
RN [1] {ECO:0000313|EMBL:KAG2613077.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AP13 {ECO:0000313|EMBL:KAG2613077.1};
RA Lovell J.T., Jenkins J., Shu S., Juenger T.E., Schmutz J.;
RT "WGS assembly of Panicum virgatum.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAG2613077.1}.
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DR EMBL; CM029043; KAG2613077.1; -; Genomic_DNA.
DR Proteomes; UP000823388; Chromosome 4K.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000823388};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT TRANSMEM 1597..1614
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1544..1573
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1544..1573
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 123..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..294
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 346..416
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 454..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 717..736
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1022..1042
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1093..1132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1225..1250
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..12
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..166
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 192..221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 349..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..382
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1026..1036
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1104..1117
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1616 AA; 176213 MW; 190AA09D9CB9239A CRC64;
MSPPGTRKRY RCAMHDSGDL ESTSSSGPPP RRQRQQLHPS YSPPPEDSFV DRAISYSGYS
GHEGFVTNSD SNNGNRMMPM ATSAMLPGSP NSLGAGYPRR APQVAPARVS VWQRIEENPS
VYAPLSPRKV HISPSKTKNS GSATKELSSV VSLDCKAKGA DYKDSGDSAG MKKNAVKSNE
KARASVLVKP SSEAKEKERA ASKVTKKSDN KVTKKPDKVE KNMPVFTSGG VRSTAGGKKV
KKIVIKKIVR KIGPKDKQTS SPIPVMAEKK DGTDANANTS EKEEGEITSS SFEKDAISAH
NLVSTSDTAG VGNTVEVQKE QNNDLVNLSK SNAAPTIAAM DIVDTASVSR REHPGKEDGK
SFMNSVDGNA SSAIESTKTF GTTGEHPRRE DDGGFIDPSG LNAGFPCDNS DSQKEEGGQI
LAVSGALNVT CNPPRMLDAV KPHECEVENI ENKVPEDLSG NNPHRGKDDT EVVSGSGNGR
REEGNFLVND SIRRSMTDEV RMTVDNEKEG MILMGASEVC VASLGDSEGA PNIPEAAVTQ
GARMEEDNML NNPREKDVLS VSSWGALGTL DISVNKNKMK ECGMPIEPSE ATASFTQQVK
ALNTLEVSVI ENVQKEIQMP IYSSSSEKIQ CPKPLSTAEV QSEAGKSSMD STGTYVGTSD
NSVFAPEFVV EGRTEDRSML HDAKSALSKS DFRREVVNTE FSDLRPSRDI GSRILPSLDD
DRMKDSSDAV SLNNGVGMNT SQVTELAHLH RTHLSPDINF SFLHSHDSPS ISGYSEHSVP
TALTLGNNMY FSSAEGEGQP EVNHKLVEEN QGFDANKRKS ESGNDLINAG VQNWLTLPLT
FSYANNDATG STDRLNLDQI MDEGASACQD HDSMPDMKQH GSIDALFGQD DSLNLCGRNT
PESDLLAAKE RNEDVENESE IILPGTVNFV NVLDQCSIHT VDKPIDKPIL LSSQAIDAPG
GELASSQVYV DPDHTYHSNA EDSVAVSIAK PDSLSSWIEA IVSEAKKEQQ LCRSTLPSIS
SPDKVLAPKE DSRKSVSDSV VSSVVKSPPR VNIASSTVLK VPTKQSSSTV LKVPTKQLVL
PCSLREPPCI NQSARHRTWR RDNVSSSNAS LHVSQPSGLP PKLPVKKNGK SQNSYIRKGN
ALIRNPATGN HPHSSSNLDA QNKLSKPVMR RSLNFVRKVD SNDAVAHTNI SVERPKTPPL
PLHTKSISSA ANLLEPLSQT LQKQQVPETE KEDSRAQVNS GVDSPLNILH KPEPLDAGKA
VYVRPKSNQV AAEQVQHPGD SSNSSMDKVL LLQPSTSDLY FKKRKNQIIL GPSTSDVSGA
KDITQAENIK SALQMTNVVG SFSHVWTLSG QHPRRKSFVG TSHMKVFPRI LPWKRKIFCQ
NLRSSYSSLL NTSSLGIVRK LLQTRKRSTI YTVSTDGFSL RKSGVLSLGG SSLKWSRSLE
KRSQKVNEEA TLAVAEVERK KREKRKRQSL RNKGRTDQYS ALVAANQLRN NNRPSSDSRA
SSTCNEYVRV NKGNQLVRNP KKVIRMLASE KVRWSLHTVR TRLAKKQQYC QFFTRFGECK
KSGGKCPYIH DRAKVAICTK FLKGLCSNTS CKLTHKVKYF FLILLLIMLL IFFFPS
//
