ID A0A8T0TVT8_PANVG Unreviewed; 1842 AA.
AC A0A8T0TVT8;
DT 12-OCT-2022, integrated into UniProtKB/TrEMBL.
DT 12-OCT-2022, sequence version 1.
DT 28-JAN-2026, entry version 7.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=PVAP13_4KG333900 {ECO:0000313|EMBL:KAG2613073.1};
OS Panicum virgatum (Blackwell switchgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum;
OC Panicum sect. Hiantes.
OX NCBI_TaxID=38727 {ECO:0000313|EMBL:KAG2613073.1, ECO:0000313|Proteomes:UP000823388};
RN [1] {ECO:0000313|EMBL:KAG2613073.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AP13 {ECO:0000313|EMBL:KAG2613073.1};
RA Lovell J.T., Jenkins J., Shu S., Juenger T.E., Schmutz J.;
RT "WGS assembly of Panicum virgatum.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAG2613073.1}.
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DR EMBL; CM029043; KAG2613072.1; -; Genomic_DNA.
DR EMBL; CM029043; KAG2613073.1; -; Genomic_DNA.
DR Proteomes; UP000823388; Chromosome 4K.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000823388};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT TRANSMEM 1823..1840
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1770..1799
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1770..1799
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 26..301
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 327..436
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 455..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..618
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 656..686
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 919..938
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1224..1244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1295..1334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1426..1452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..76
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 77..98
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 114..133
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 140..154
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..165
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..277
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 336..353
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..368
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..423
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 551..562
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 564..584
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1228..1238
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1306..1319
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1842 AA; 202090 MW; 0EC617800BD74569 CRC64;
MDPHAPFDHP HHRRGHPAHH HYLDQHHLHH LPGGGGGGGV APSRSRYDYE YDSHPIPYLP
SDHHPHHSLP RAHHHQSPPP PPPPPPPPQP LSPPPPPAPH HRHDGPHYAT LPLRAPPEPY
SPPPHRNPTP PHYPYYHQRH GGDDDFRASD EIRRVPSHPH PHHLQPLHYH QQLQHHHQQP
PLSWEEAEEE EGRRYPAHQL RGMSPPGTRK RYRCAMHDSG DLESTSSSGP PPRRQRQQLH
PSYSPPPEDS FVDRAISYSG YSGHEGFVTN SDSNNGNRMM PMATSAMLPG SPNSLGAGYP
RRAPQVAPAR VSVWQRIEEN PSVYAPLSPR KVHISPSKTK NSGSATKELS SVVSLDCKAK
GADYKDSGDS AGMKKNAVKS NEKARASVLV KPSSEAKEKE RAASKVTKKS DNKVTKKPDK
VEKNMPVFTS GGVRSTAGGK KVKKIVIKKI VRKIGPKDKQ TSSPIPVMAE KKDGTDANAN
TSEKEEGEIT SSSFEKDAIS AHNLVSTSDT AGVGNTVEVQ KEQNNDLVNL SKSNAAPTIA
AMDIVDTASV SRREHPGKED GKSFMNSVDG NASSAIESTK TFGTTGEHPR REDDGGFIDP
SGLNAGFPCD NSDSQKEEGG QILAVSGALN VTCNPPRMLD AVKPHECEVE NIENKVPEDL
SGNNPHRGKD DTEVVSGSGN GRREEGNFLV NDSIRRSMTD EVRMTVDNEK EGMILMGASE
VCVASLGDSE GAPNIPEAAV TQGARMEEDN MLNNPREKDV LSVSSWGALG TLDISVNKNK
MKECGMPIEP SEATASFTQQ VKALNTLEVS VIENVQKEIQ MPIYSSSSEK IQCPKPLSTA
EVQSEAGKSS MDSTGTYVGT SDNSVFAPEF VVEGRTEDRS MLHDAKSALS KSDFRREVVN
TEFSDLRPSR DIGSRILPSL DDDRMKDSSD AVSLNNGVGM NTSQVTELAH LHRTHLSPDI
NFSFLHSHDS PSISGYSEHS VPTALTLGNN MYFSSAEGEG QPEVNHKLVE ENQGFDANKR
KSESGNDLIN AGVQNWLTLP LTFSYANNDA TGSTDRLNLD QIMDEGASAC QDHDSMPDMK
QHGSIDALFG QDDSLNLCGR NTPESDLLAA KERNEDVENE SEIILPGTVN FVNVLDQCSI
HTVDKPIDKP ILLSSQAIDA PGGELASSQV YVDPDHTYHS NAEDSVAVSI AKPDSLSSWI
EAIVSEAKKE QQLCRSTLPS ISSPDKVLAP KEDSRKSVSD SVVSSVVKSP PRVNIASSTV
LKVPTKQSSS TVLKVPTKQL VLPCSLREPP CINQSARHRT WRRDNVSSSN ASLHVSQPSG
LPPKLPVKKN GKSQNSYIRK GNALIRNPAT GNHPHSSSNL DAQNKLSKPV MRRSLNFVRK
VDSNDAVAHT NISVERPKTP PLPLHTKSIS SAANLLEPLS QTLQKQQVPE TEKEDSRAQV
NSGVDSPLNI LHKPEPLDAG KAVYVRPKSN QVAAEQVQHP GDSSNSSMDK VLLLQPSTSD
LYFKKRKNQI ILGPSTSDVS GAKDITQAEN IKSGESKSLM FASSNNNMTV AKDRPHKALQ
MTNVVGSFSH VWTLSGQHPR RKSFVGTSHM KVFPRILPWK RKIFCQNLRS SYSSLLNTSS
LGIVRKLLQT RKRSTIYTVS TDGFSLRKSG VLSLGGSSLK WSRSLEKRSQ KVNEEATLAV
AEVERKKREK RKRQSLRNKG RTDQYSALVA ANQLRNNNRP SSDSRASSTC NEYVRVNKGN
QLVRNPKKVI RMLASEKVRW SLHTVRTRLA KKQQYCQFFT RFGECKKSGG KCPYIHDRAK
VAICTKFLKG LCSNTSCKLT HKVKYFFLIL LLIMLLIFFF PS
//
