ID A0A918D254_9BACI Unreviewed; 190 AA.
AC A0A918D254;
DT 22-FEB-2023, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2023, sequence version 1.
DT 18-JUN-2025, entry version 12.
DE SubName: Full=DNA-directed RNA polymerase sigma-70 factor {ECO:0000313|EMBL:GGN59954.1};
GN ORFNames=GCM10007971_23580 {ECO:0000313|EMBL:GGN59954.1};
OS Oceanobacillus indicireducens.
OC Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
OC Oceanobacillus.
OX NCBI_TaxID=1004261 {ECO:0000313|EMBL:GGN59954.1, ECO:0000313|Proteomes:UP000624041};
RN [1] {ECO:0000313|EMBL:GGN59954.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JCM 17251 {ECO:0000313|EMBL:GGN59954.1};
RX PubMed=30832757;
RA Wu L., Ma J.;
RT "The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing
RT project: providing services to taxonomists for standard genome sequencing
RT and annotation.";
RL Int. J. Syst. Evol. Microbiol. 69:895-898(2019).
RN [2] {ECO:0000313|EMBL:GGN59954.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JCM 17251 {ECO:0000313|EMBL:GGN59954.1};
RA Sun Q., Ohkuma M.;
RL Submitted (SEP-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein.
CC {ECO:0000256|ARBA:ARBA00024764}.
CC -!- SIMILARITY: Belongs to the UPF0122 family.
CC {ECO:0000256|ARBA:ARBA00008720}.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GGN59954.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BMOS01000015; GGN59954.1; -; Genomic_DNA.
DR RefSeq; WP_188857626.1; NZ_BMOS01000015.1.
DR Proteomes; UP000624041; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF8; RNA POLYMERASE SIGMA FACTOR HI_1459-RELATED; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000313|EMBL:GGN59954.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000624041};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000313|EMBL:GGN59954.1};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..80
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
SQ SEQUENCE 190 AA; 23025 MW; 0BEFA9C635538C46 CRC64;
MSKKQQFTFE EIFEQNERRI HYHLHKLNIR DPHHEFFQEG LIGMWKAYEK YQPNKGPLGT
YFNFMIRNRL IDSIRKESRR MEKEVLASKD EEGAFDTEIF HKANNATHEE SSLDEHLKHN
SDLWKHIRDL LTENQWKWLK YYVIEDLTIK EIAKQEEASI EAVKGWAKEA RRKLRKDTDL
EKLIKNNLEP
//
