ID A0A924N4U0_9CAUL Unreviewed; 234 AA.
AC A0A924N4U0;
DT 22-FEB-2023, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2023, sequence version 1.
DT 02-APR-2025, entry version 7.
DE SubName: Full=RNA polymerase sigma factor RpoD {ECO:0000313|EMBL:MBC7669780.1};
DE Flags: Fragment;
GN ORFNames=H7236_15335 {ECO:0000313|EMBL:MBC7669780.1};
OS Caulobacter sp.
OC Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
OC Caulobacterales; Caulobacteraceae; Caulobacter.
OX NCBI_TaxID=78 {ECO:0000313|EMBL:MBC7669780.1, ECO:0000313|Proteomes:UP000636790};
RN [1] {ECO:0000313|EMBL:MBC7669780.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=FL-bin-218 {ECO:0000313|EMBL:MBC7669780.1};
RA Zeng Y.;
RT "Metagenome-assembled genomes from the Lille Firn glacier at the Villum
RT Research Station in northeast Greenland.";
RL Submitted (AUG-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBC7669780.1}.
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DR EMBL; JACMOF010000446; MBC7669780.1; -; Genomic_DNA.
DR Proteomes; UP000636790; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.220.120; Sigma-70 factor, region 1.1; 1.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007127; RNA_pol_sigma_70_r1_1.
DR InterPro; IPR042189; RNA_pol_sigma_70_r1_1_sf.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF03979; Sigma70_r1_1; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 25..96
FT /note="RNA polymerase sigma factor 70 region 1.1"
FT /evidence="ECO:0000259|Pfam:PF03979"
FT DOMAIN 113..145
FT /note="RNA polymerase sigma-70 region 1.2"
FT /evidence="ECO:0000259|Pfam:PF00140"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 194..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..210
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..226
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 234
FT /evidence="ECO:0000313|EMBL:MBC7669780.1"
SQ SEQUENCE 234 AA; 24866 MW; 21F033D57CA21B31 CRC64;
MSTTTTDGAE PPESGGGDGP LLDLTDAGVK KFIKQAKARG YVTMDELNKV LPSEEVTSEA
IEDTLAMLSE MGVNVVEAEE DAETSEGGEV VAREDNQQVI TSDKPAAYDR TDDPVRMYLH
EMGSVELLSR EGEIAIAKRI EAGRDTMIRG LCESALTFEA IMVWREELGT GRILLREVID
LEGTYAAING VAAAPAAEDA EPAEPAESDP DAPKAEGDDD EDDFDDGAGP TVSA
//