ID A0A934RKC2_9BACT Unreviewed; 638 AA.
AC A0A934RKC2;
DT 22-FEB-2023, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2023, sequence version 1.
DT 28-JAN-2026, entry version 15.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:MBK1833302.1};
GN Name=selB {ECO:0000313|EMBL:MBK1833302.1};
GN ORFNames=JIN78_04445 {ECO:0000313|EMBL:MBK1833302.1};
OS Roseibacillus ishigakijimensis.
OC Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
OC Verrucomicrobiales; Verrucomicrobiaceae; Roseibacillus.
OX NCBI_TaxID=454146 {ECO:0000313|EMBL:MBK1833302.1, ECO:0000313|Proteomes:UP000604083};
RN [1] {ECO:0000313|EMBL:MBK1833302.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KCTC 12986 {ECO:0000313|EMBL:MBK1833302.1};
RA Feng X.;
RT "Modified the classification status of verrucomicrobia.";
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBK1833302.1}.
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DR EMBL; JAENIO010000007; MBK1833302.1; -; Genomic_DNA.
DR RefSeq; WP_200390734.1; NZ_JAENIO010000007.1.
DR AlphaFoldDB; A0A934RKC2; -.
DR Proteomes; UP000604083; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR PANTHER; PTHR43721:SF11; SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09106; WHD_2nd_SelB; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:MBK1833302.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000604083}.
FT DOMAIN 1..174
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 638 AA; 69336 MW; 0F34333C88A0F75E CRC64;
MNFILGTAGH IDHGKSSLVQ ALTGTNPDRL PEEQKRGVTI ELGFAHLALT GPDGEDLQVG
VVDVPGHADF VNNMVAGVGA LDLALIVVAA DDGWMPQSEE HLHILSYLGV TRAVIALSKV
DLAEDAEFAV EFVRDALQGS AFAESPIVPV SAHTGEGIAQ LRETIARTLA TSPTPEDLGV
PLLPVDRAFS VKGIGTIITG TLSRGALSTG DRLLLQPQGL PVNVRGIQNH NTSLEQARPG
MRTAVNIPDV AVDSRKERGV KRGQILTQPE AGHPSDTLDV ALTRLARPIP AQPGSERVMK
NNQKVRLHHG SGRVNARVSL LEGELAPGQS GLAQLRLEEP LFTFSNDHIV IRDWSGEATL
AGARVLDAHG SRRHLGKEEH QTALRTLAAE NSPAAFLRYL LHKRHFLPGK PAPQDFPYSN
RSFKDALRAL QKSKEVARLG NGHVASQWWE SLLAQAQSLV TAYHEENPDL PGLPLQTVRR
HFAREFARLD LFPHLLESLA EREITNEGDC LKALSHRTDI PPELADEAEA IMQTLAQEQL
QAPNRKELAP TPAAERALAF LIRVGKVISL DEKTVLAAEA VTRAAETVRS HLQDKEPATA
SELRQVLDTS RRIAMPLLEH FDAQGLTRRE GDVRLLKS
//
