ID A0A934TVN2_9BURK Unreviewed; 754 AA.
AC A0A934TVN2;
DT 22-FEB-2023, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2023, sequence version 1.
DT 02-APR-2025, entry version 10.
DE SubName: Full=Arginine/lysine/ornithine decarboxylase {ECO:0000313|EMBL:MBK6007720.1};
GN ORFNames=JJB11_16595 {ECO:0000313|EMBL:MBK6007720.1};
OS Ramlibacter ginsenosidimutans.
OC Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
OC Burkholderiales; Comamonadaceae; Ramlibacter.
OX NCBI_TaxID=502333 {ECO:0000313|EMBL:MBK6007720.1, ECO:0000313|Proteomes:UP000630528};
RN [1] {ECO:0000313|EMBL:MBK6007720.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KACC 17527 {ECO:0000313|EMBL:MBK6007720.1};
RX PubMed=22450785;
RA Wang L., An D.S., Kim S.G., Jin F.X., Kim S.C., Lee S.T., Im W.T.;
RT "Ramlibacter ginsenosidimutans sp. nov., with ginsenoside-converting
RT activity.";
RL J. Microbiol. Biotechnol. 22:311-315(2012).
RN [2] {ECO:0000313|EMBL:MBK6007720.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KACC 17527 {ECO:0000313|EMBL:MBK6007720.1};
RA Kang M.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-I family.
CC {ECO:0000256|ARBA:ARBA00010671}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBK6007720.1}.
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DR EMBL; JAEPWM010000007; MBK6007720.1; -; Genomic_DNA.
DR RefSeq; WP_201173759.1; NZ_JAEPWM010000007.1.
DR Proteomes; UP000630528; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:TreeGrafter.
DR GO; GO:0008792; F:arginine decarboxylase activity; IEA:TreeGrafter.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:TreeGrafter.
DR GO; GO:0006527; P:arginine catabolic process; IEA:TreeGrafter.
DR FunFam; 3.40.640.10:FF:000008; Lysine decarboxylase, inducible; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.90.100.10; Orn/Lys/Arg decarboxylase, C-terminal domain; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR005308; OKR_de-COase_N.
DR InterPro; IPR011193; Orn/lys/arg_de-COase.
DR InterPro; IPR000310; Orn/Lys/Arg_deCO2ase_major_dom.
DR InterPro; IPR008286; Prn/Lys/Arg_de-COase_C.
DR InterPro; IPR036633; Prn/Lys/Arg_de-COase_C_sf.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR45229:SF3; BIODEGRADATIVE ARGININE DECARBOXYLASE; 1.
DR PANTHER; PTHR45229; CONSTITUTIVE ORNITHINE DECARBOXYLASE; 1.
DR Pfam; PF01276; OKR_DC_1; 1.
DR Pfam; PF03711; OKR_DC_1_C; 1.
DR Pfam; PF03709; OKR_DC_1_N; 1.
DR PIRSF; PIRSF009393; Orn_decarb; 1.
DR SUPFAM; SSF55904; Ornithine decarboxylase C-terminal domain; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR PROSITE; PS00703; OKR_DC_1; 1.
PE 3: Inferred from homology;
KW Decarboxylase {ECO:0000256|ARBA:ARBA00022793};
KW Lyase {ECO:0000256|ARBA:ARBA00023239};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW ECO:0000256|PIRSR:PIRSR009393-1};
KW Reference proteome {ECO:0000313|Proteomes:UP000630528}.
FT DOMAIN 392..406
FT /note="Orn/Lys/Arg decarboxylases family 1 pyridoxal-P
FT attachment site"
FT /evidence="ECO:0000259|PROSITE:PS00703"
FT MOD_RES 397
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR009393-1"
SQ SEQUENCE 754 AA; 84411 MW; BDF26BFA6413B43A CRC64;
MKFRFPIVII DEDYRSENTS GLGIRALAEA IVAEGFEVLG VTSYGDLSQF AQQQSRASAF
ILSIDDEEFT PGPDLDPAVL NLSNFISEVR RKNPDVPIYV YGETKTSQHL PNAILRELHG
FIHMYEDTPE FMARHIIREA KSYLEGIQPP FFKALLDYAE DGSYSWHCPG HSGGVAFLKS
PVGQMFHQFF GENMLRADVC NAVDELGQLL DHTGPIAASE RNAARIFNAD HCFFVTNGTS
TSNKMVWSHE VAPGDVVVVD RNCHKSILHS IIMTGAIPVF LKPTRNHFGI IGPIPQSEFS
PEAIKAKIKA HPLLQGVDPE TVKPRILTLT QSTYDGVLYN TETIKGLLDG YVEALHFDEA
WIPHACFHPF YGTFHAMGKK RPRPQTSLVY STQSIHKLLA GISQASHVLV QDAVDNKLDR
HLFNEAYLMH TSTSPQYAII ASCDVAAAMM EPPGGTALVE ESILEALDFR RAMRKVDQEY
GKDWWFKVWG PDKLAEEGIG RADDWIIKGE ARTAKWHGFG NLAEGFNMLD PIKCTVVTPG
LDLNGKFAKT GIPAAIVTKF LAEHGVIVEK TGLYSFFILF TIGITKGRWN TLLSALQQFK
DDYAKNQPMW RILPEFCQQY PRYERMGLAD LCQYVHELYA KYDIAKLSTD IYLSDLQPAM
RPSDAFAHIA HRKTDRVEID ELEGRITTAL ITPYPPGIPL LIPGEVFNKR IVEYLKFARA
FNEECPGFET DIHGLVAEAG PDGKLRYFAD CVAQ
//
