ID A0A9D4Z107_CHLVU Unreviewed; 207 AA.
AC A0A9D4Z107;
DT 03-MAY-2023, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2023, sequence version 1.
DT 05-FEB-2025, entry version 7.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=D9Q98_000289 {ECO:0000313|EMBL:KAI3437843.1};
OS Chlorella vulgaris (Green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella.
OX NCBI_TaxID=3077 {ECO:0000313|EMBL:KAI3437843.1, ECO:0000313|Proteomes:UP001055712};
RN [1] {ECO:0000313|EMBL:KAI3437843.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=211/11P {ECO:0000313|EMBL:KAI3437843.1};
RX PubMed=31437318;
RA Cecchin M., Marcolungo L., Rossato M., Girolomoni L., Cosentino E.,
RA Cuine S., Li-Beisson Y., Delledonne M., Ballottari M.;
RT "Chlorella vulgaris genome assembly and annotation reveals the molecular
RT basis for metabolic acclimation to high light conditions.";
RL Plant J. 100:1289-1305(2019).
RN [2] {ECO:0000313|EMBL:KAI3437843.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=211/11P {ECO:0000313|EMBL:KAI3437843.1};
RC TISSUE=Whole cell {ECO:0000313|EMBL:KAI3437843.1};
RA Cecchin M., Marcolungo L., Rossato M., Girolomoni L., Cosentino E.,
RA Cuine S., Li-Beisson Y., Delledonne M., Ballottari M.;
RL Submitted (NOV-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00009307}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAI3437843.1}.
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DR EMBL; SIDB01000001; KAI3437843.1; -; Genomic_DNA.
DR OrthoDB; 10256606at2759; -.
DR Proteomes; UP001055712; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:TreeGrafter.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006384; P:transcription initiation at RNA polymerase III promoter; IEA:TreeGrafter.
DR CDD; cd04330; RNAP_III_Rpc25_N; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.1490.120; RNA polymerase Rpb7-like, N-terminal domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR013238; RNA_pol_III_Rbc25.
DR InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR InterPro; IPR045113; Rpb7-like.
DR InterPro; IPR005576; Rpb7-like_N.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR12709; DNA-DIRECTED RNA POLYMERASE II, III; 1.
DR PANTHER; PTHR12709:SF1; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8; 1.
DR Pfam; PF08292; RNA_pol_Rbc25; 1.
DR Pfam; PF03876; SHS2_Rpb7-N; 1.
DR SUPFAM; SSF88798; N-terminal, heterodimerisation domain of RBP7 (RpoE); 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP001055712};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 82..162
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 207 AA; 22949 MW; 6540A31FA9B4ACBD CRC64;
MFILSQLEDN VRIAPQDLGK PAELAISAAL EKAFLDRVVP NLGLVVTLHD ILSIGDGCVY
PSDGGAHYKV SFRVIVFRPF SGELLVGKVL KMTRDGVYVD LGFFQDILIA PGDMPEPSYW
KEDDKAWLWR MEGQDLFFEQ GMPLRVKVQS VDFNAVPTLS QQQEQADGGE AVVGSKSRPF
VPMEVKGRAD GDGLGMVHWY VADDEME
//
