GenomeNet

Database: UniProt
Entry: A0A9D5CN18_9LILI
LinkDB: A0A9D5CN18_9LILI
Original site: A0A9D5CN18_9LILI 
ID   A0A9D5CN18_9LILI        Unreviewed;       135 AA.
AC   A0A9D5CN18;
DT   03-MAY-2023, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2023, sequence version 1.
DT   05-FEB-2025, entry version 6.
DE   RecName: Full=Vacuolar protein sorting-associated protein 55 homolog {ECO:0008006|Google:ProtNLM};
GN   ORFNames=J5N97_017348 {ECO:0000313|EMBL:KAJ0975383.1}, J5N97_017355
GN   {ECO:0000313|EMBL:KAJ0975390.1};
OS   Dioscorea zingiberensis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Dioscoreales; Dioscoreaceae;
OC   Dioscorea.
OX   NCBI_TaxID=325984 {ECO:0000313|EMBL:KAJ0975383.1, ECO:0000313|Proteomes:UP001085076};
RN   [1] {ECO:0000313|EMBL:KAJ0975383.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Dzin_1.0 {ECO:0000313|EMBL:KAJ0975383.1};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAJ0975383.1};
RA   Li Z., Yang C.;
RL   Submitted (MAR-2021) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KAJ0975383.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Dzin_1.0 {ECO:0000313|EMBL:KAJ0975383.1};
RX   PubMed=36204203;
RA   Li Y., Tan C., Li Z., Guo J., Li S., Chen X., Wang C., Dai X., Yang H.,
RA   Song W., Hou L., Xu J., Tong Z., Xu A., Yuan X., Wang W., Yang Q., Chen L.,
RA   Sun Z., Wang K., Pan B., Chen J., Bao Y., Liu F., Qi X., Gang D.R., Wen J.,
RA   Li J.;
RT   "The genome of Dioscorea zingiberensis sheds light on the biosynthesis,
RT   origin and evolution of the medicinally important diosgenin saponins.";
RL   Hortic Res 9:0-0(2022).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the OB-RGRP/VPS55 family.
CC       {ECO:0000256|ARBA:ARBA00005645}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAJ0975383.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JAGGNH010000004; KAJ0975383.1; -; Genomic_DNA.
DR   EMBL; JAGGNH010000004; KAJ0975390.1; -; Genomic_DNA.
DR   OrthoDB; 14246at2759; -.
DR   Proteomes; UP001085076; Miscellaneous, Linkage group lg04.
DR   GO; GO:0005768; C:endosome; IEA:TreeGrafter.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IEA:TreeGrafter.
DR   InterPro; IPR007262; Vps55/LEPROT.
DR   PANTHER; PTHR12050; LEPTIN RECEPTOR-RELATED; 1.
DR   PANTHER; PTHR12050:SF1; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG; 1.
DR   Pfam; PF04133; Vps55; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP001085076};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        12..30
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        36..56
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        76..95
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        101..124
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   135 AA;  14700 MW;  1BD0F9A6FC42250A CRC64;
     MARYSLCLKT GELACLAILV SGGIVLQVLA CALYNNWWPM LTALMYVILP MPLLFFAGSN
     SSSIMSSDSN NGWMNFTKFL TGASVVGSIA IPSILRHAGV IGSGALIMEL SSFIVFVVAV
     LWYLRMGNED EYNMF
//
DBGET integrated database retrieval system