ID A0A9J5XZQ2_SOLCO Unreviewed; 193 AA.
AC A0A9J5XZQ2;
DT 28-JUN-2023, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2023, sequence version 1.
DT 05-FEB-2025, entry version 9.
DE RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU369086};
GN ORFNames=H5410_035075 {ECO:0000313|EMBL:KAG5593843.1};
OS Solanum commersonii (Commerson's wild potato) (Commerson's nightshade).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4109 {ECO:0000313|EMBL:KAG5593843.1, ECO:0000313|Proteomes:UP000824120};
RN [1] {ECO:0000313|EMBL:KAG5593843.1, ECO:0000313|Proteomes:UP000824120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LZ3.2 {ECO:0000313|EMBL:KAG5593843.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAG5593843.1};
RA Cho K.;
RT "De no assembly of potato wild relative species, Solanum commersonii.";
RL Submitted (SEP-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase which catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. {ECO:0000256|RuleBase:RU369086}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU369086}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00009307}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAG5593843.1}.
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DR EMBL; JACXVP010000007; KAG5593843.1; -; Genomic_DNA.
DR OrthoDB; 10256606at2759; -.
DR Proteomes; UP000824120; Chromosome 7.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:TreeGrafter.
DR GO; GO:0006384; P:transcription initiation at RNA polymerase III promoter; IEA:TreeGrafter.
DR FunFam; 3.30.1490.120:FF:000002; DNA-directed RNA polymerase III subunit RPC8; 1.
DR FunFam; 2.40.50.140:FF:000488; Predicted protein; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.1490.120; RNA polymerase Rpb7-like, N-terminal domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR013238; RNA_pol_III_Rbc25.
DR InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR InterPro; IPR045113; Rpb7-like.
DR InterPro; IPR005576; Rpb7-like_N.
DR PANTHER; PTHR12709; DNA-DIRECTED RNA POLYMERASE II, III; 1.
DR PANTHER; PTHR12709:SF1; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8; 1.
DR Pfam; PF08292; RNA_pol_Rbc25; 1.
DR Pfam; PF03876; SHS2_Rpb7-N; 1.
DR SUPFAM; SSF88798; N-terminal, heterodimerisation domain of RBP7 (RpoE); 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU369086};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU369086};
KW Reference proteome {ECO:0000313|Proteomes:UP000824120};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU369086}.
FT DOMAIN 8..64
FT /note="RNA polymerase Rpb7-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03876"
FT DOMAIN 83..192
FT /note="RNA polymerase III subunit Rpc25"
FT /evidence="ECO:0000259|Pfam:PF08292"
SQ SEQUENCE 193 AA; 21963 MW; 7BFCCC942CAEA0F1 CRC64;
MFYLSEIEHK LRLPPHLLNL PLNEAIKGEL EGLFVDKVIA NLGLIISIYD IRSIDDGFIY
PSEGASTYTV KFRLVVFRPF VGEVITAKLK ESKAEGLRLS LGFFDDIYVP APLLPDPSRS
EPDPENKNQV RWIWKFDELD YPIDGVDEIR FQVHNVSYPS MPLEQDKDSK PFAPMVIKGS
LDADGLGPIS WWI
//
