ID A0A9J5ZIZ5_SOLCO Unreviewed; 1787 AA.
AC A0A9J5ZIZ5;
DT 28-JUN-2023, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2023, sequence version 1.
DT 28-JAN-2026, entry version 11.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=H5410_023225 {ECO:0000313|EMBL:KAG5611944.1};
OS Solanum commersonii (Commerson's wild potato) (Commerson's nightshade).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4109 {ECO:0000313|EMBL:KAG5611944.1, ECO:0000313|Proteomes:UP000824120};
RN [1] {ECO:0000313|EMBL:KAG5611944.1, ECO:0000313|Proteomes:UP000824120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LZ3.2 {ECO:0000313|EMBL:KAG5611944.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAG5611944.1};
RA Cho K.;
RT "De no assembly of potato wild relative species, Solanum commersonii.";
RL Submitted (SEP-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAG5611944.1}.
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DR EMBL; JACXVP010000004; KAG5611944.1; -; Genomic_DNA.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP000824120; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000824120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1529..1558
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1584..1610
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1633..1661
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1529..1558
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1584..1610
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1633..1661
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 34..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 176..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 243..266
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..380
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 419..475
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 653..686
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 972..998
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1010..1036
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1069..1132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1725..1746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1761..1787
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..50
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..204
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 248..260
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 350..373
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..471
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 972..995
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1081..1094
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1096..1105
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1730..1739
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1778..1787
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1787 AA; 195443 MW; 53450A30346A3281 CRC64;
MDIDTNPSRD FRLNPGNYEL RDDRYEDERW EYGGNVDEVP VGSSSRRVSS LDNGNDYGDV
RFSNRLRVDK EEIHRSPQKK QVQKKSALLR IQCGKANNRS RNQDHDLSSG AVRGKQKDVF
ERLERRVEER EGSQMELDVS FKSNALVAKA IMTPSSSAID SDRSEAPRCK KIRKMNFSGS
PTKRIGDDLG KGNGSANDSG CRPSSNQEFN CLADKITVSA VGSSSKCTLG SYKDSRHLAS
KITDSVDGRT SNGTLNNNES KLLPDEDTVS VASSPSNSTS LLSSTVTNDL TGIKESKESA
EIKVLNQGSN HVEKFRIPFF IVRKKKVTKK KVINPINVKF PSDEVVSKLE KPSKLSAVSK
DESVEQSKSD GKKASPAKVL VSSSVDSEIN GVADYTSRSV QSVPSTMNFE TCMIEVQNKP
TSSDADNTGH VGGNSEDDLR VSEYGPIKES SESMACEERN GDGREIHKDE VSSSTEDTYI
SADSGLGFSD GKKNAVAAIG SFGAGSVEPS SDPNIVPLLT NIEKGLRESF LNGNDSSSNS
DETGRIAVVN YLQTAECLSN SDPRAGTFGG SFESCVDGVT LSPEMRHTKG SINAVVSVGD
DLRIIVDDDC LPKVTRKRKI MDDESVLPTT KMSKTGENVV SYLLGQGNNF SCFREDHSSE
EEDGTVSGNG TDSLKGDHSH GGPSEVELSL QDCFKDDSDS CSTKSPKKSE VSSPAKVKSV
PCVTTYEEPS SRPITVPMIN DVSVTELESR NTLTNVDDSP LARPSVNVLE SSSTAKGVCQ
AEPFEDGLMD HFSDVQQVIP HNSQLGAVGQ ETTTSVVSIE MLRMADRVSD DKGSSVGMDQ
KLAPEGHESC NYVLDRDDMP LLADNLSLFA NKVSVKSMES VPDMSLLVSF PDLTNSSVSE
EPIDKSSMSS EIVIEKALRV DENSITAYDN ISSSVKTSSD AFEFGRSSDH KVGGDDPLVN
VSTVALSSQN TVKSSKNVSS QGWKPNLGAN QQSPAGSRVL SVRPSSFITP RNVPVPKKPL
TWHRTGNSSS SVVGRGSQMN ALPPQSHLSK DTAKVGSYIR KGNCLVRNPS PVGSVPKGYH
SPSSSTYRLN SSGVNDLRRK CENRAEITGS PSCSGTPEVN APSERPKTPT QSESFSFITL
VSTSSPVVDH PGNGSIATNS DPMEVTDSIL ALKPSEHPST SSAVPECQIG LGGDSGSQNT
LDEGSSKKNI VYVKQRLNQL LAASDKTQTS SDGYYKRRKN QLIRASGNNH MKQRIVTTKN
IVPFQRGTKR LNGKDILLQL IIFGAVGLAK TSKLSKFSLV WKLGDTQSSR KYGGTVEYEK
LWPYLFPWKR ASYRRSFLSS SPSDNSSIIR RKLLLSKKRE TIYTRSIHGL SLRRSKVLSV
SGSSLKWSKS IEQRSKKATE EAALAVASVD KRKRGQYGFN ADSMNGNNVS RKFYSVKLLP
GERIFRIGCE RYKMDSSGKT LQRISDEEPS VSVPEAKKSY IPKRLLIGND EYVRVGNGNK
LVRNPKRRVR ILASEKVRWS LHTARIRLAR KKQYCQFFTR FGKCNKDNGK CPYIHDPSKI
AVCSKFLNGS CSDTNCKLTH EVIPERMQDC SYFLQGICAN ENCPYRHVNV NPNASICEGF
LRGYCADGNE CQKKHSYVCP LFEATGNCPK GSKCKLHHPK NRRKGVKRKA LSELKNGRGR
YFGSPHIDIT ECITAGSEKP SVKGNNDIFL EGKFVDFISL DGSDEEEQTI DQRSEEKPLC
ESGSAEMQLD DLDELIKPMR LINRNRSVGS SPYIDSPSDM TTSYVSE
//
