ID A0A9J7N1I4_BRAFL Unreviewed; 612 AA.
AC A0A9J7N1I4;
DT 28-JUN-2023, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2023, sequence version 1.
DT 18-JUN-2025, entry version 12.
DE SubName: Full=Uncharacterized protein LOC118422811 {ECO:0000313|RefSeq:XP_035686479.1};
GN Name=LOC118422811 {ECO:0000313|RefSeq:XP_035686479.1};
OS Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC Branchiostomatidae; Branchiostoma.
OX NCBI_TaxID=7739 {ECO:0000313|Proteomes:UP000001554, ECO:0000313|RefSeq:XP_035686479.1};
RN [1] {ECO:0000313|Proteomes:UP000001554}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 {ECO:0000313|Proteomes:UP000001554};
RX PubMed=32313176;
RA Simakov O., Marletaz F., Yue J.X., O'Connell B., Jenkins J., Brandt A.,
RA Calef R., Tung C.H., Huang T.K., Schmutz J., Satoh N., Yu J.K.,
RA Putnam N.H., Green R.E., Rokhsar D.S.;
RT "Deeply conserved synteny resolves early events in vertebrate evolution.";
RL Nat. Ecol. Evol. 0:0-0(2020).
RN [2] {ECO:0000313|RefSeq:XP_035686479.1}
RP IDENTIFICATION.
RC STRAIN=S238N-H82 {ECO:0000313|RefSeq:XP_035686479.1};
RC TISSUE=Testes {ECO:0000313|RefSeq:XP_035686479.1};
RG RefSeq;
RL Submitted (MAR-2025) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_035686479.1; XM_035830586.1.
DR GeneID; 118422811; -.
DR KEGG; bfo:118422811; -.
DR OMA; CWERNIT; -.
DR OrthoDB; 4327074at2759; -.
DR Proteomes; UP000001554; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd22249; UDM1_RNF168_RNF169-like; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR050863; CenT-Element_Derived.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeodomain-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR19303:SF74; POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAIN; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF05225; HTH_psq; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001554}.
FT DOMAIN 22..62
FT /note="HTH psq-type"
FT /evidence="ECO:0000259|Pfam:PF05225"
FT DOMAIN 74..147
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|Pfam:PF03221"
FT DOMAIN 223..362
FT /note="DDE-1"
FT /evidence="ECO:0000259|Pfam:PF03184"
FT REGION 494..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 500..515
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 517..538
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..565
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 612 AA; 68220 MW; 172B256C9C27C5A4 CRC64;
MDLTQVNGLG TTPVKKYMGY DPSQMEKAIQ SVRKGDFTPN KAAKVYEVPR KTLTDHLKGR
HPLTTGGQTA LRDEEETALV GYITQMAEWG HPISVPILKA LAGEIHARSC TTDGLTPKFR
GCEATGKLVA GRKWWRGFKK RHPRIAARAQ DPLSRERARM SSQAVVDEFF NMYTRIMEDN
GLGKKPHLIH NCDETGVSMQ MNRGRVLVPK GVRGVPSASS GTKDRVTFHI AITAEGKTLA
PMIIYKKSFP SGAYSQTGPD NTLYAVSDAG FMDKQLFEKW FCYHYIPSLT NERPVLLLLD
QCEAHLSVKT IQTAMDEDII LLGLPPHTSH FLQPLDMTCF SSLKDTLGSI VQGLMYENAA
FQLSKRNISK VLKAAYEKSF TMCTVKKGFE STGMYPCNKG AVSRRWLAVG EPVADVTHAP
SPTSSEVTHA PSTSCQPCKT PGCQVCGPPR ANALVGRMIP ASLSDLLVPP QVVERTRVSK
AIKTARVFTT EDVLQEQVEK KKKREERLAK KKNKGQGKTE EERGEEKENE DKAQNPRTEK
KRKREVRQKL PEEQKKEKRK RSEEGEKQDE ELTVATTSSL SLRGTRSRRP PVWASGYVMS
TTGTEEEYVT EG
//
