ID A0A9N8MHZ1_9FLAO Unreviewed; 288 AA.
AC A0A9N8MHZ1;
DT 13-SEP-2023, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 1.
DT 28-JAN-2026, entry version 9.
DE SubName: Full=RNA polymerase sigma factor SigA {ECO:0000313|EMBL:CAD7814767.1};
GN Name=sigA {ECO:0000313|EMBL:CAD7814767.1};
GN ORFNames=CHRY9390_02860 {ECO:0000313|EMBL:CAD7814767.1};
OS Chryseobacterium aquaeductus.
OC Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Weeksellaceae; Chryseobacterium group; Chryseobacterium.
OX NCBI_TaxID=2675056 {ECO:0000313|EMBL:CAD7814767.1, ECO:0000313|Proteomes:UP000662618};
RN [1] {ECO:0000313|EMBL:CAD7814767.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CECT 9390 {ECO:0000313|EMBL:CAD7814767.1};
RA Rodrigo-Torres L., Arahal R. D., Lucena T.;
RL Submitted (DEC-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CAD7814767.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CAJIMS010000001; CAD7814767.1; -; Genomic_DNA.
DR RefSeq; WP_034757900.1; NZ_CAJIMS010000001.1.
DR AlphaFoldDB; A0A9N8MHZ1; -.
DR Proteomes; UP000662618; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR050239; Sigma-70_RNA_pol_init_factors.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000662618};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 17..47
FT /note="RNA polymerase sigma-70 region 1.2"
FT /evidence="ECO:0000259|Pfam:PF00140"
FT DOMAIN 54..123
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 135..207
FT /note="RNA polymerase sigma-70 region 3"
FT /evidence="ECO:0000259|Pfam:PF04539"
FT DOMAIN 222..275
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 288 AA; 32987 MW; B80F4007CE598B15 CRC64;
MRQLKITKQV TNRETASLDK YLQEIGKVEL ITADEEVDLA QKIRAGDRVA LEKLIKANLR
FVVSVSKQYQ NQGLSLPDLI NEGNLGLMKA AKRYDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN KIGSINKINK AYAHLEQENE RPPSPEELAE VLDMSEEDIK ESMKNSGRHL
SMDAPLVEGE DSNLYDVLRS GESPSPDKDL MLESLQIEIE RALNTLTPRE ADLVRLYFGL
NGKHPMTLEE IGETFDLTRE RVRQIKEKAI KRLKHNTRSK ILKSYLGK
//
