ID A0A9P1CKV9_9DINO Unreviewed; 1538 AA.
AC A0A9P1CKV9;
DT 13-SEP-2023, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 1.
DT 10-JUN-2026, entry version 9.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:CAL4781469.1};
GN ORFNames=C1SCF055_LOCUS20827 {ECO:0000313|EMBL:CAL4781469.1};
OS Cladocopium goreaui.
OC Eukaryota; Sar; Alveolata; Dinophyceae; Suessiales; Symbiodiniaceae;
OC Cladocopium.
OX NCBI_TaxID=2562237 {ECO:0000313|EMBL:CAL4781469.1, ECO:0000313|Proteomes:UP001152797};
RN [1] {ECO:0000313|EMBL:CAL4781469.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Chen Y., Shah S., Dougan E. K., Thang M., Chan C.;
RL Submitted (MAY-2024) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CAL4781469.1}.
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DR EMBL; CAMXCT030001913; CAL4781469.1; -; Genomic_DNA.
DR OrthoDB; 10248475at2759; -.
DR Proteomes; UP001152797; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF14787; zf-CCHC_5; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP001152797};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 473..486
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 426..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 483..569
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 839..883
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1115..1137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1150..1191
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..10
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 430..454
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 488..515
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 546..557
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 843..859
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1179..1189
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1538 AA; 169543 MW; 99B2CB9362849608 CRC64;
MEQPARDRSP RGRSQTRRGV SLPATTGYAP GNANASVPFV FEEQLNRVRM SMDTLQAEVG
KAVRELAGHQ KTLVDTLERQ QHELNDIRAQ RVPIPPSASQ SVAAANEDRF GAMGEASPFT
SGQDPPIQLP VNAQQGAGGL ASAMPNTAVN ASSSTGHGVK IVLPDGTEIP LGGQSNAAGP
KVPGSTQLDA LQRSDKWLPS MPVVESNRWK SRMEEILGME QWLDSFCNWL SLISEPFCTE
VKFSATSPLP IDKKDLSTDQ ISRSSRLMAM LRQTFQMTPR AKIILLAYVE GPGDKNGYEA
LRRIVQEYMI KTRAELMHFR TSLLGRTFKA QTVTEVIKQI EFEESRYNKL ARMLPSNVPA
SDLALLPSDL VMVLIKSLPV GVREYVVMHS PSHDYVQMKN AALLYEANQR TWTEIAGSSS
ATYMHGMFDT NDKPKGKGKS KDGKKGKGKA KDSNKGAAKG NGEKSEKERN ATCFRCGRTG
HFSSNCHAKK DKDGKPLEGK PAPKKDGKGS GEEKGSSTGP QNKGKGKGSK GKKVNEMLEQ
PEGESWPTNG PAESQGSNGD GSRASAAKQA AAPLNPILPT QSWFEDTIVQ FEREQITEEQ
FDLVHGSFLM EEQFSSDFDF SCFGNPSDLW SKTKHVCTMS AAVFMPMMPD VPSDLHWWLI
DSGASASVVS SRFLKHYEVV KNQVLGPATG PGFSSASGET IHPTSLVCLK AFFRLTSRED
PSDTMLKECL VSAFVADVPN NVLSVGSLLR KGWSLSSSGS ELEVCFGGYN LDLVTWQNVP
WIFHEVETVM DFSDDRDLQK TFWSRRKIHD GPVNTVEHLS ETDKSMLMTT KRQPDVSLEE
LDPAAASSSS PAYVSSRPVS DSESPYRESL SVEPNSVPDS SEPFDYEPNM IVDTNTGFAS
IPSEESSEHP AVLRKRDLNK SKLEQHRRQG HFPFHADCLS CQAAKSTTHH RRKKKSVLSS
EMACDFFFLN LDKANKESFK YLIMVDLTTG MKGVAPVQSD IRLSHRWIQA WLGEFNMSTE
CSEPIEIITD AEEAVSSFMK GAINHRPASF VKAPPQGHQT IGGAEAGVRA IKDAFNTLRQ
DLRENGCDVC IRNQTAVNVP ASLKKDCISR FEKVRRLSGK QKPPPGLGEA DQPVQQRFPD
FPANREKRVS FDLPKNQPIP ESLPVEGGQH LDENPHDVPY SPSLAPSSPK ALDEPEVIHD
MEVDDSADGM VDLSEFAAAG GEPTATEAME LDLVTALDNF ELSYLEERHI GMLQSVYQIR
GVKPKSSKAN LCGEEILLLF PGYVISDANG QYLDKDLAYA GMHTEIDSMT SQKVGRPIHE
QEAQRLAKQW QISIITCRWV CVEKDPLNVR MRLVAREMAK GKSSARDLMV SSPTSSIESL
RILIAEAAVL DLVILGLDIS AAFMASPLGN SDTTEYIPAD AEPTESTQVS ELEQILKLSQ
SLAVAADEFT FELPKRNRPG RAIFSEMMSR WAMQLRFSQR KGVRMSYTSF DAYSLFGRWR
TLNQSLITCC KLQANVAPTK HMKTNLLLAK SSSLFDFT
//
