GenomeNet

Database: UniProt
Entry: A0A9Q0CHT6_9POAL
LinkDB: A0A9Q0CHT6_9POAL
Original site: A0A9Q0CHT6_9POAL 
ID   A0A9Q0CHT6_9POAL        Unreviewed;       303 AA.
AC   A0A9Q0CHT6;
DT   13-SEP-2023, integrated into UniProtKB/TrEMBL.
DT   13-SEP-2023, sequence version 1.
DT   28-JAN-2026, entry version 7.
DE   RecName: Full=Regulatory particle non-ATPase 13 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=LUZ63_010930 {ECO:0000313|EMBL:KAJ1694232.1};
OS   Rhynchospora breviuscula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Cyperaceae; Cyperoideae;
OC   Rhynchosporeae; Rhynchospora.
OX   NCBI_TaxID=2022672 {ECO:0000313|EMBL:KAJ1694232.1, ECO:0000313|Proteomes:UP001151287};
RN   [1] {ECO:0000313|EMBL:KAJ1694232.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=RhyBre1mFocal {ECO:0000313|EMBL:KAJ1694232.1};
RX   PubMed=35926507;
RA   Hofstatter P.G., Thangavel G., Lux T., Neumann P., Vondrak T., Novak P.,
RA   Zhang M., Costa L., Castellani M., Scott A., Toegelov H., Fuchs J.,
RA   Mata-Sucre Y., Dias Y., Vanzela A.L.L., Huettel B., Almeida C.C.S.,
RA   Simkova H., Souza G., Pedrosa-Harand A., Macas J., Mayer K.F.X., Houben A.,
RA   Marques A.;
RT   "Repeat-based holocentromeres influence genome architecture and karyotype
RT   evolution.";
RL   Cell 185:3153-3168(2022).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC       Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAJ1694232.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JAMQYH010000003; KAJ1694232.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A9Q0CHT6; -.
DR   OrthoDB; 340431at2759; -.
DR   Proteomes; UP001151287; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IEA:TreeGrafter.
DR   GO; GO:0061133; F:endopeptidase activator activity; IEA:TreeGrafter.
DR   GO; GO:0070628; F:proteasome binding; IEA:TreeGrafter.
DR   CDD; cd13314; PH_Rpn13; 1.
DR   FunFam; 1.10.2020.20:FF:000002; 26S proteasome regulatory subunit RPN13; 1.
DR   FunFam; 2.30.29.70:FF:000001; Proteasomal ubiquitin receptor ADRM1; 1.
DR   Gene3D; 1.10.2020.20; -; 1.
DR   Gene3D; 2.30.29.70; Proteasomal ubiquitin receptor Rpn13/ADRM1; 1.
DR   InterPro; IPR044867; DEUBAD_dom.
DR   InterPro; IPR006773; Rpn13/ADRM1.
DR   InterPro; IPR044868; Rpn13/ADRM1_Pru.
DR   InterPro; IPR038633; Rpn13/ADRM1_Pru_sf.
DR   InterPro; IPR032368; RPN13_DEUBAD.
DR   InterPro; IPR038108; RPN13_DEUBAD_sf.
DR   PANTHER; PTHR12225; ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN; 1.
DR   PANTHER; PTHR12225:SF0; PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; 1.
DR   Pfam; PF04683; Rpn13_ADRM1_Pru; 1.
DR   Pfam; PF16550; RPN13_C; 1.
DR   PROSITE; PS51916; DEUBAD; 1.
DR   PROSITE; PS51917; PRU; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW   Reference proteome {ECO:0000313|Proteomes:UP001151287}.
FT   DOMAIN          5..117
FT                   /note="Pru"
FT                   /evidence="ECO:0000259|PROSITE:PS51917"
FT   DOMAIN          187..290
FT                   /note="DEUBAD"
FT                   /evidence="ECO:0000259|PROSITE:PS51916"
FT   REGION          122..146
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   303 AA;  33701 MW;  DBD2B78C0CB17AA1 CRC64;
     METANLQDVM LEFRAGKMLL EGTQVVPDTR KGLVRIGRGE EGLLHFQWLD RSQNIVEDDQ
     IVFPDEAVFE KVTQSSGRVY ILKFTSDNRK FFFWMQEPSA EGDLEICNSV NTCLNRPLDM
     MGDDEAEGSV PVPEMSEEAT EDDLSSRAGN LVDQSMATDL TGEVTSSAGP VQLEDLQRIL
     RNIQAPVEDP DARIGLGDIL KPDLVSPLIE TLPVEQTLAS YLPEGSQSRA DIIELFQSPP
     FRQQLDTFTH VLRTGQIDLS QFGVDPTKYR FTVVSFLEAL EDSVAKASEA ETSSMQKDAM
     DES
//
DBGET integrated database retrieval system