ID A0A9Q0ZDH3_SALVM Unreviewed; 1950 AA.
AC A0A9Q0ZDH3;
DT 13-SEP-2023, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 1.
DT 02-APR-2025, entry version 8.
DE SubName: Full=CCCH ZINGC FINGER {ECO:0000313|EMBL:KAJ6730530.1};
GN ORFNames=OIU85_021337 {ECO:0000313|EMBL:KAJ6730530.1};
OS Salix viminalis (Common osier) (Basket willow).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix.
OX NCBI_TaxID=40686 {ECO:0000313|EMBL:KAJ6730530.1, ECO:0000313|Proteomes:UP001151529};
RN [1] {ECO:0000313|EMBL:KAJ6730530.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Shoot tip {ECO:0000313|EMBL:KAJ6730530.1};
RA Hyden B.L., Feng K., Yates T., Jawdy S., Smart L.B., Muchero W.;
RL Submitted (NOV-2022) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAJ6730530.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Shoot tip {ECO:0000313|EMBL:KAJ6730530.1};
RX PubMed=36769224; DOI=10.3390/ijms24032904;
RA Hyden B., Feng K., Yates T.B., Jawdy S., Cereghino C., Smart L.B.,
RA Muchero W.;
RT "De Novo Assembly and Annotation of 11 Diverse Shrub Willow (Salix) Genomes
RT Reveals Novel Gene Organization in Sex-Linked Regions.";
RL Int. J. Mol. Sci. 24:2904-2904(2023).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAJ6730530.1}.
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DR EMBL; JAPFFL010000004; KAJ6730530.1; -; Genomic_DNA.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP001151529; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP001151529};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT DOMAIN 1867..1896
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1867..1896
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 233..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 502..538
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 575..609
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 834..854
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 946..965
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1316..1346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1361..1393
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1432..1464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..30
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..58
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..280
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 519..529
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 579..605
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1316..1327
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1362..1371
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1444..1460
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1950 AA; 214000 MW; B1D1602615C80DD1 CRC64;
MDPRSSYFHH TKYANPPSPS PTLPPPPPLY PNSLNFHHHI NFLAPPPPPQ QQPRPPQTPQ
FSPRNLQFSY NHSPNQPQTH DNYHRQLSHH DLPHFTQLPR VSHQFNDERQ PPRRLPEFDH
RAHEPRPDFR VFRNDQQTRH ELEGNPNPNS RLVQDRNILI ERESEHYHIR GGFGSNSDRS
YAGDFRTVSN QVRGFESNSG NYENRRRLNY DYHEKGSENQ RWFRDREVMI DQRDSSTEFG
SNEIGDGETR IATGKREHYR SREGNSEVER HGSKRSREGS YEFNRTPRKQ VQKKSALLRL
QQPNYRNRED ERVPYLGYVD DTKSSSFRGK DQESGFFRGK DKVIHTDCEM GEGEREGSPV
ELDVSFKSNS LVAKAILTPS SSSVGAFETI LTPRNSKVRK VLVLAEDKDS NNSSMNKPNK
VAVEVGKGAS VASKASSSDK DLKKSREGVI ASGITNVRDS SSLPLKNRVE MPMKRTVSVR
IGSSGKTSPL SGKKKKIVKR VVKKGVSHSS TLSSSQPTKI RDEHVKADSS AHSPAEPLDI
DKAATVADVV DSQPCPIEAT VIPENDRVER FEKFMESGQA GSSADSVNSS GNKNCSRSPP
GSSNHNKTKF GESFVNGDCA KGLHAISNID NSLTKPLDEI ISSDIGDVED FSKQPCQNGD
SCSLENNAVR GSLKVMDSFE GNTDFGVLSL EKTIIHEDPP NSCIPMMGLD VSSINSQQRI
MVSDKGTSDV GGNEPCRNQG SSLAESGITD LLQGPSFPVG SNEIFSVSIS GETGNQNAVI
HLNQGAGTIL GSPNSFTNLE EINISGHGTG DGIGEELSQD GVAKTLNSVP IRDSLDTKVS
TGGSEEDANE ITKNDKKIEM PQLDLSRTDV PDMHLEPANM VTSTTAHWVN TTLRLCFEDD
ATDQCTFSGA QFVDAGSQSC SNVVSALHEG SLTDVSAAKV SVRSSADVGQ SGVPRWNEKN
RKSSVPQLEL CSPVESDDDE GPVFAGNSTS GMEVPSNSCS SPTLPKGEAV VSDMDSLCSS
DLLLAQKGIT ALLENGSAGE HFSPVASIED VFEVDGLKDV QSHLTVEDLA VKKVSSRGRS
VSGVKDIINT TPVVIGGRNQ NDSMDIDDVE GAKVDINVAE AQVGIESVSD HCQIPSKPRT
QYMDQILPSI DVDDGGFHGA KNDSPCMSYN PSSFGDGFGV SSTNSGDELM EIVPETLSDR
DSPETLPDVM VTSLSKNSVE KIHENDDKIP VERAVINVSS STSVSSSQKA KVVLNLDHTV
DRDQLLTGKT GHLPSQDSKI TSQMPFIKNG ELYGKKNHDS HAVSKIYSGR SSFVFTGSKS
SASSSRISKT RTWHRTDNCS DSAPPANKAF LSTVPALRQF PRKADRSERT SYIRKGNSLV
RKPTSAAQSP GLHGLSSSAY QLNSSCIDEP KKSAGSNSRI DLADPLSAVK TGGMDASLEK
PRTPSLSSVS KISNRASNSL GGRASSPLAE HLHSLCTETV TVPAKLLESN DIAKSSDKVL
KISESPIIQN SQISNLECHS DLNDVNNMVL ANGKSLTYVK RKSNQLVAAS NPCASSAQNA
HNTSSSDSYY KRRKNQLIRT PLESQVKQTA SIPDESLNSE EQTALNSFSR SFSKRRLRKV
VTKTCKPSKL SLVWTLHGAQ LSKNDGDSLH CGKVLPHLFP WKRATYRRSS LPNSSSISDH
SSLSTIGRKL LLLRKRNTVY TRSKHGFSLR KSKVLSVGGS SLKWSKSIEK HSKKANEEAT
LAVAAAERKK REQRGAVSIA CPTKSRNSSR ELTQRERIFR IGSLRYKMDS SRRTLQRISD
DESSSGALQK EKDAKKMYIP RRLMIGKDEY VRIGNGNQLV RDPKKRTRIL ASEKVRWSLH
TARSRLARKR KYCQFFTRFG KCNKDDGKCP FIHDSSKIAV CTKFLNGLCF NPGCKLTHKV
IPERMPDCSY FLQGAPAPPP FLLCFCIIYW
//
