ID A0A9R1XFA2_LACSA Unreviewed; 1561 AA.
AC A0A9R1XFA2;
DT 13-SEP-2023, integrated into UniProtKB/TrEMBL.
DT 13-SEP-2023, sequence version 1.
DT 28-JAN-2026, entry version 11.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=LSAT_V11C400209580 {ECO:0000313|EMBL:KAJ0212470.1};
OS Lactuca sativa (Garden lettuce).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236 {ECO:0000313|EMBL:KAJ0212470.1, ECO:0000313|Proteomes:UP000235145};
RN [1] {ECO:0000313|EMBL:KAJ0212470.1, ECO:0000313|Proteomes:UP000235145}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Salinas {ECO:0000313|Proteomes:UP000235145};
RC TISSUE=Seedlings {ECO:0000313|EMBL:KAJ0212470.1};
RX PubMed=28401891; DOI=10.1038/ncomms14953;
RA Reyes-Chin-Wo S., Wang Z., Yang X., Kozik A., Arikit S., Song C., Xia L.,
RA Froenicke L., Lavelle D.O., Truco M.J., Xia R., Zhu S., Xu C., Xu H.,
RA Xu X., Cox K., Korf I., Meyers B.C., Michelmore R.W.;
RT "Genome assembly with in vitro proximity ligation data and whole-genome
RT triplication in lettuce.";
RL Nat. Commun. 8:14953-14953(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAJ0212470.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; NBSK02000004; KAJ0212470.1; -; Genomic_DNA.
DR Proteomes; UP000235145; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000235145};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1310..1340
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1366..1392
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1393..1420
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1310..1340
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1366..1392
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1393..1420
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 244..263
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 301..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 381..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..509
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 847..895
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 967..989
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1167..1201
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1441..1468
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..43
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..73
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..107
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 108..139
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..361
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 381..392
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..424
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 480..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 852..871
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 882..891
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..977
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1168..1177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1182..1198
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1441..1464
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1561 AA; 174853 MW; F09F9BE7633A6E5E CRC64;
MEFPSFNHHH HHNRYVPPPP PTNFSDDRPN LYPHHQQHLL PSLHLPPPPP LAYPSLPPPP
PPPLPVPPPP PSYNPHQSHF TFLDAQNPSF SNHGRSSPPQ PRFSNQSHRF DYRTDSWSDS
HRVPPELTHR NPILPDEHHR RLYSPDPRSE NHYKPHVSER VIPSSRYRDE NIINGYASRD
ASNIVSQEQQ AFRGSSNNDD HQGRIIDRYA SAQATGCNSR NEDFVEKYEP RYISNSENER
IWDHHGEDSR RKGKKNEFGN NDGVLFVSGR EQARDYEYES SRLTRVREGR EEFKQVQKRS
VLLRIGKPNN TNRNRSHDQH FSKAHMVESN NSNFRGKDKD RDHANKDSDH RMEGDREHSP
VELDVSFKSN ALVAKAVVTP SSPVIGNNNT QLRNKKTKRG SEFNSPLKRS GSSSNGLDCP
SSSEKAPKQQ KLSLKDPVLG QGAATGPLSF RLKKKRKLIN FKNSPSVSIF QLAEKDNKSV
KGQNKNSPSA ESTPSTLEEP ISSKVVSEKD SSEVEKLVSK IDDGLVNEVS LNLENDTQQV
STDAKVGTPI SASCGQDQIE IQNCPTESYA SFDAFSAVKN ESFKIQEMTT CACSDEIINL
VPENGNTVGF LDGVSRKKDG TQETPNANAI AIAEDNAILT GRSYEASEIQ SHGENLQNVG
PGPTPNSSIK VISSDEDEIV EIVELNSESV ETQRPDHREE DEIVEIVELN FESQKPEDEV
VGIVELNSES TETQRLDHRE LCTDEIPPAS SIVCRQPDEK PGEPMPDMLT NIVSGFPKDE
TTSTSNSNLG NNDVNICEKF VPEPEDGGGN TSVENYSKTS SIIKPSDLSG TKTTTSQVLN
KKMPIKRPNP TVFATRSSPV FTNSRVNNPS KSIAKPPRTW HRSVNNTSSV PRPTKQVGAV
QNAYIRSGNT LVRKGSPVTT ISRSSIYQLN PSGPSPTETR TAAVVRPKTP PLSGYTATKL
PDSTTLKVSP LEDQNCSESH KSLDEGGTAG KKIEYVKPKS NQLVAATSSV QELDKSSDGY
YKRRKNQLIR TLVADDSVPD VRKAAKGMFK KYRNSRFSSV WTLGAQSLGK DGVSLRQKLR
PHLFPWKRTK FWGNASASMH SNNLSSLLSR KLLVSRKREM IYTRSKHGFS LRMSKLLSVG
GSGLKWSKSI EKNSKQANEE ATLAVAAAEK KRREQQHLKS RNNNNNNNNN NNNNNNNNMS
RDRIFRIGLV RYKMDPSRRT LQRISGGSVL VEFDRERIEG FYHYEEPSTS KSSKEEMRRS
YVPKRLLIGH DEYLRIGNGN QLVRNPKRRT RLFANEKVRW SLHTARSRLA RKKKYCQFFT
RFGKCNKDND GKCPYIHDSS KIAVCTKFLK GLCSNPHCNL THKVIPERMQ DCSYFLQGLC
SNEHCPYRHV NVNSAASVCE AFLKGYCADG NECRKKHTYA CPAFEATGEC SQGTNCKLHH
PKNRSTGGLK RKHQNQKTQK HSRGRYFGTV GGGGGGGEEA ERQHHFNLKD ILCQEGKLGA
DYISIDFGDG VTDETTTVVT SEEDPLLLVG EEEEEAHLDL DHLTKPIGIM KNFNLHTSHM
A
//
