ID A0A9X3ER50_9BACT Unreviewed; 663 AA.
AC A0A9X3ER50;
DT 08-NOV-2023, integrated into UniProtKB/TrEMBL.
DT 08-NOV-2023, sequence version 1.
DT 28-JAN-2026, entry version 12.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:MCY1008764.1};
GN Name=selB {ECO:0000313|EMBL:MCY1008764.1};
GN ORFNames=OV079_25040 {ECO:0000313|EMBL:MCY1008764.1};
OS Nannocystis pusilla.
OC Bacteria; Pseudomonadati; Myxococcota; Polyangia; Nannocystales;
OC Nannocystaceae; Nannocystis.
OX NCBI_TaxID=889268 {ECO:0000313|EMBL:MCY1008764.1, ECO:0000313|Proteomes:UP001150924};
RN [1] {ECO:0000313|EMBL:MCY1008764.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Na p29 {ECO:0000313|EMBL:MCY1008764.1};
RA Ahearne A., Stevens C., Phillips K.;
RT "Minimal conservation of predation-associated metabolite biosynthetic gene
RT clusters underscores biosynthetic potential of Myxococcota including
RT descriptions for ten novel species: Archangium lansinium sp. nov.,
RT Myxococcus landrumus sp. nov., Nannocystis bai.";
RL Submitted (NOV-2022) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MCY1008764.1}.
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DR EMBL; JAPNKE010000002; MCY1008764.1; -; Genomic_DNA.
DR RefSeq; WP_267771375.1; NZ_JAPNKE010000002.1.
DR AlphaFoldDB; A0A9X3ER50; -.
DR Proteomes; UP001150924; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09106; WHD_2nd_SelB; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:MCY1008764.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP001150924}.
FT DOMAIN 5..184
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 663 AA; 68904 MW; 433C96C2C0A7F27C CRC64;
MAKPVRDLVL GTAGHIDHGK TALVRALTGV DTDRLPEEKR RGITIDLGFA AWQLGPGLVA
SIVDVPGHEA FVRTMVAGAG GVDAVLLVVS AEEGVMPQTR EHLLVCRLLG ITHGVVALSK
IDRLHGDAEA LALAEADVRA ALEDLAPGLA GAAVVPCSAH TGVGVPELAA AVRRVAAALP
ARPSRDRPIL PIDRCFVLKG HGTVVTGTLL AGQLEIAADP YFNLVPAGEH RPVRELRARA
LHVRGAAATR VPAGARAAVN LGGIAVAELA RGDVLTRGHR VVAAASVHVL LEHLPHDSRT
WRSGTSVQVC AGTAHTTGRL DPLGPLAGAE DAPKTMSIPP GTSALVRIRL DAPLPVWHGQ
RVVLRSHGGD LVHGHTCGGG VVIDPGPRPG RGQRSRWLRV ARALAGSDLR ARVAALLTDA
GALAISRDEL KLRAGASDLE AVLSDMVQSA DAVRLGDSRH VAAAVLPELA AAAVAVAVRF
QAAHPDRPGL SRAALLGGLP GRVAPDVAAA ALEHALARGL LEQRGDVLVR GGTEPTPGLS
PIGHKVLDLY VRAGVAPPTL KEVQTGANLS ERQALDALTA LQKAGALVRV SADLSLAREH
HATLVEKVRV HLRSSPQIDV QALKALTGLS RKFVVPFLEH LDRLGITRRQ GEVRVAGPKL
HGA
//
