ID A0AAD5JTV7_ACENE Unreviewed; 2108 AA.
AC A0AAD5JTV7;
DT 29-MAY-2024, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2024, sequence version 1.
DT 08-OCT-2025, entry version 8.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=LWI28_007878 {ECO:0000313|EMBL:KAI9200434.1};
OS Acer negundo (Box elder).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Sapindaceae; Hippocastanoideae; Acereae; Acer.
OX NCBI_TaxID=4023 {ECO:0000313|EMBL:KAI9200434.1, ECO:0000313|Proteomes:UP001064489};
RN [1] {ECO:0000313|EMBL:KAI9200434.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=91603 {ECO:0000313|EMBL:KAI9200434.1};
RX PubMed=34967059; DOI=10.1111/tpj.15657;
RA McEvoy S.L., Sezen U.U., Trouern-Trend A., McMahon S.M., Schaberg P.G.,
RA Yang J., Wegrzyn J.L., Swenson N.G.;
RT "Strategies of tolerance reflected in two North American maple genomes.";
RL Plant J. 109:1591-1613(2022).
RN [2] {ECO:0000313|EMBL:KAI9200434.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=91603 {ECO:0000313|EMBL:KAI9200434.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAI9200434.1};
RA Swenson N.G., Wegrzyn J.L., Mcevoy S.L.;
RL Submitted (FEB-2023) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAI9200434.1}.
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DR EMBL; JAJSOW010000001; KAI9200434.1; -; Genomic_DNA.
DR Proteomes; UP001064489; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP001064489};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1869..1898
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1924..1950
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1973..2001
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1869..1898
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1924..1950
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1973..2001
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 599..627
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1060..1091
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1296..1319
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1339..1368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1441..1494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1519..1538
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1993..2028
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..64
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..100
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 599..613
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1060..1074
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1461..1477
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1484..1493
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1994..2018
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2108 AA; 234019 MW; 3F7A5F6B52FA326B CRC64;
MDPPYSRYVP ISSQNPNFHG PPPVYHHLHH HLAPAHPPQP PPPPPPPPQS LPPPPPPLPP
PPHQPQFHHH PLPALPPPTH PKSPYNSNNL PLTFNTNFNP NPKPNNPNHH RPRSHDFPHI
EDDRYLYRNR PLPGFESRPD LWDPPRVIPG HRPLINNSEH HQQFDHRPVS PYRSIENPRH
ELEGNYRFRE RYKSDGFAFE HNSSNNQRAE MVPHRNHFAS DSERLNSGTY SNLHGTRFND
SELTRSNLRD VVFGRQSLRE REIRDSSFEM GSKNENRGKR ELHWSESGRY GYNRGSKENS
YEYNRTPRKQ IQKKSAFLRI QKPFYRNRDN DEELQYSTYF DEISSYRNED QILYSDHGVV
EKEERKGSPV ELDVSFKSNS LVAKAIVTPP SSAVVSDTNL TPKSGKIRKV KLSSKDFSSS
QMNKLRKSNR NLDSSEDVNS ASGSGDKDLK QSEKEIPPCV IHDMHNDDSQ PCSGGNNDSL
SKFTVERSKR IASDTRSIDV GSSKTSLLSV TKKKRVVKLK HSDTHVSSLQ PNEKVDVRVK
KDGSTFNAPA ATVPKKGKKL LKQKITSAGR ASVQLPCQNE PTMLLKNEKI TSPHTLVSDQ
VSTSVNSGSS CATKTKRKRN SSISPLASLH RRETKFDEGS ENADNSIRGL QNISNTDKDL
TNSLNETIVS ASGSVEGVTK QFFHNEESLM LDNSDTKQSP KVLFSVSRDI NYDLLSSEEM
IRQENHVDTC SIAHRMSASI NFDDGLVSLQ EKISNQAISS VDSNTVEGIP LAILPGRTSK
IFAQSSSEEI GIHNVSIHSD CSNHDIGSDN VCINSEEINV ETGDYAGKQL SLERFTSSFE
NDATEGLQNT LYPVGGIEES MPNTTNNSKV TTSPETITDM DMRPVNAASS AQCIDTTCVH
TCLSLSVKDF NPAEATVSSG LDVSLQPCAD EVTVMHESNL TCGFSKDKAL VNCGFTGTSP
EKSKRRKVST SYPGFSNAML SEISEGPAGT DLSMSSVEMP SNFSEGLVQP EQRTEVSKMD
SLCTSGLPRC LDKTQVLCED SSERLSSEVV VSVGTDAFRD RTDGSKIDQQ RADSENSDIP
NAISGFPQGY RGEQTENAVP VLAGMNDNIE DMFIESKKEE KMKAVAGEEQ VMTCSASQFK
TPSQHLSPDL NQRLPSTYVD SNGYLLEKDH FPSVSASMPF ASRGDGVSTT TSNDEMMEFD
TLSDIGTPEI LSSVPVMQSS TCKESPSQIS NEVISGDVMM PNEDLVVEGT SNLSVSPQYA
KIDLKSNYAP ESAHSVVVRA GSLTSQDVKS LSHNLNLRSG ETSGKKNQPN QAISRTYPSC
PSSVFTSKNT ASLTHNTKPL TWHRSDKSSA SPVLGNKPFS HTVPKPHQFS RKVTKFQSMS
YIRKGNSLVR KPAPVVALPK VSHALPSSVY RLNSSGIGEL KKSFGPDSRA GNIDMSNILR
TGGVGAPVER PRTPPLPTVT KMKNCTTNSS GDCTSSPLAE PLPNSCSETT SDPQKFIDCK
DVPNSSSDAL KISETPVNQT ASANSLESQG EPNDGTLATS NVKRITYVKR KSNQLVAASS
HCGLPIQNAD KTQGFISDGY YKRRKNQLIR SSVESHINGT VTLPDDNLLS EGKTAPKASF
SRNFITTKIC RPSRFSLVWT PSNMQSKKND DHSSYRRKVM PYLIPWKRTG YRKCFLQNSA
SISNNSSLSA ISRKLLLLRK RDAVYTRSGR GFSLRKSKVL SVGGSSLKWS KSIERRSKKA
NEEATLAVAA VGRKQSEQNG AASIASGTKN RSNSSRERIF RIGSVRYKMD SSRRTLQRIS
DDESSHSAAL NLEKNGKRSY IPRRLVIGND EYVRIGNGNQ LIRDPKKRTR VLASEKVRWS
LHTARLRLAR KRKYCQFFTR FGKCNKDDGK CPYIHDPSKI AVCTKFLNGL CSNSDCKLTH
KVIPERMPDC SYFLQGLCTN KSCPYRHVHV NPNSSTCEGF LRGYCADGNE CRKKHSYACP
FFEATGSCPE GSKCKLHHPK SQKKGKKSKR SRQRKNSRGR YFGSHHMDYS EPQIMRSERQ
SEQDKGDVTF EGNFAEYITL VISGEEAGET YDALNEQTYL YDSDNSDFQL DDLDELIKPI
RIMDSMTK
//
